Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_2436 |
Symbol | |
ID | 8411980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 2338786 |
End bp | 2340045 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 645020779 |
Product | Haloacid dehalogenase domain protein hydrolase type 3 |
Protein accession | YP_003178253 |
Protein GI | 257388480 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.454359 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00185111 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAGCAGT ACGACAGACT CTACCGACTC TACGACGACT TCGATACGGC GTCGTTGCGG GCCTATCAGG AGTTCGTCGA CCTCTTTCCA CCGGTCGACT CGCGAGTCGC ACTGGACCAC TGGCAGGACG CCAGCGACGA ACTGGACGAG CGAAAGCGCG AGATCCGGGA GGCGTACCCG ACGACCGGCG AGCGCTACGC GGCGATCGCG GCGTACCTCG ATCGCGATCA GGCCTTTACC GCGCTGGATC TGGCGACCGA GTACGGCCGG CCGATCAACG CGCTCGTACT CGACGTCGAC GAGACGCTGC GCAGTGCCGG GACGACCGAC AACGAGATCC CCCGAGAGAC GCTCCACCTC CTCGATCTCC TCCACGAGGA CGGCATTCCG ATCGTCGTCT GTACCGGCCA GACCCTGGAG AACGTCAAGG GATTCCTCAT CCAGGGGCTC GGCAACGCCT TCGTCCACTC GGGAGACGTG AGCATCGTCT ACGAGTCGGG CAACGGCGTG TTCACGCCCC GCCACGGCAG CCAGACCAAG CGGCTGCTGT ACGAATCGCT GGACGAGTCG ATCACGAACG TCTTCGACAC CGTGCGTTCG CGGATCCTCG CCGACGCCCC CGACGCCATC GCGCGAGGCT GTCACCTCCA GGGCAACGAG TTCAACGTCA CGCTGAAGCC AAACGCCGAG AACGGCACCC GCAAGGCGGT CGAGATCATC GACGACGGCC TGCTGTACCT GCTCGATCTC CTCGGCGAGA CGGTCGCGAG CGAGGTCGAT GCCGACGTGG ACGAGCCCGG CGACTGGGCG CGGGCGTACT ACGCGTCCGA TCCCGAGATC CGCGCGGTCA TCGAAGACGC GGGGGAGGGA CAGGAAGCCA GCCCCGACGA GATGCCGCCC GCCCTCCGGT CGCTGTTCGA CCGCATCGAC CTGGGATACT ACGAAGGTGA CGCCGCGGAG ATCGTCAGCC TCGAACTCGA CAAGCCGGCC GGGGTCCGGG CTGCATTCGA CGTACTCGAC ATCGACGATC CGTTCGCGCT CGTGATGGGC GACAGCAAGA GCGACCTCCG GGTCATGGAG TGGCTCGAAC GAGACGACGC CGGCATCGCC GCCGCGCCGG AACACGCCTC GCGGGACGTG CTCGATCACG TCGTCCGGAC GAACGAACTC CTCTTCGACG CGGGCGACGC CGCTGCGGTG CTGGCGGTCG TCTACGGCCT GAACCGCCTC GTCACGAGCC GCGACGACGC GGACCGGTGA
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Protein sequence | MKQYDRLYRL YDDFDTASLR AYQEFVDLFP PVDSRVALDH WQDASDELDE RKREIREAYP TTGERYAAIA AYLDRDQAFT ALDLATEYGR PINALVLDVD ETLRSAGTTD NEIPRETLHL LDLLHEDGIP IVVCTGQTLE NVKGFLIQGL GNAFVHSGDV SIVYESGNGV FTPRHGSQTK RLLYESLDES ITNVFDTVRS RILADAPDAI ARGCHLQGNE FNVTLKPNAE NGTRKAVEII DDGLLYLLDL LGETVASEVD ADVDEPGDWA RAYYASDPEI RAVIEDAGEG QEASPDEMPP ALRSLFDRID LGYYEGDAAE IVSLELDKPA GVRAAFDVLD IDDPFALVMG DSKSDLRVME WLERDDAGIA AAPEHASRDV LDHVVRTNEL LFDAGDAAAV LAVVYGLNRL VTSRDDADR
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