Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_2435 |
Symbol | |
ID | 8411979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 2337670 |
End bp | 2338713 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645020778 |
Product | halocyanin domain protein |
Protein accession | YP_003178252 |
Protein GI | 257388479 |
COG category | [C] Energy production and conversion |
COG ID | [COG3794] Plastocyanin |
TIGRFAM ID | [TIGR02656] plastocyanin [TIGR03102] halocyanin domain |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000875368 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACCGACG CCGACGTGAC TCGCCGACGC CTGCTACAGG GCGCGGCCGG GCTCACCGTC GCGGCCGCCG CCCGTCCCGC GGTCGCGCAG TCCGACGGGC CTGACTTCGG GGGCTGGTTC GACAACGTGG GCAACTACGA CGGCGTGGTC GACGAGACTG GCAGCGACGA AGTGACGATC TCCGTCGGTG CAGACGCTAA CGGCGGTGCC TTCGGATTCG ATCCGGCAGC CGTCGAGGTG TCGCCGGGAA CGACGGTCGT CTGGGAGTGG ACCGGTAGCG GCGGCTCGCA CAACGTCGTC GCGGAAGACG GTACGTTCGA GAGCGAACTC ACCAAGGAGA GCGGCCACAC CTTCGAGTAC ACGTTCGAGG AAACGGGCAC CTACGAGTAC GCCTGTACGC CCCATCGCTC GATGGGGATG AAGGGTGCCG TCGTGGTCAG CGAGGGCGGC GGCTCTGGGA CCGAGACGGC CCAGAGCGAG GAGAGCGGCG GATCGGATCC GGACTTCGGG AGCTGGTTCG ACAACGTGGG CAACTACGAC GGCGTGGTCG ACGAGACCGG CAGCGACGAA GTGACGGTCT CCGTCGGTGC AGACGCTAAC GGCGGTGCCT TCGGATTCGA TCCGGCGGCC GTCGAGGTGT CGCCGGGGAC GACGGTCGTC TGGGAGTGGA CCGGTAGCGG CGGCTCGCAC AACGTCGTCG CGGAAGACGG TACGTTTGAA AGCGAACTCA CGAAAGAGAG CGGTTTCACG TTCGAGTACA CGTTCGAGGA AGCGGGCACC TACGAGTACG CCTGTACGCC CCACCGCTCG ATGGGGATGA AGGGTGCCGT CGTCGTCTCG GAGGCCGGTT CCGGTGCCAG CGGCGACGGA GGCGGTGGCG AAAGCGGCGG TAACTCGGGT GGCGATCCGT TCTCACCGGG TGCCAGCGCG CTCGGCATCT CACTGCTGAT CGCGTTCCTC TCCCCGCTCG GACTGGCCGC GTTCCTCCGA CGACGGGGAG CGGACGAGCC GGGCTCCGGC GGTCGCCCAC GCTCTGGCGA CTGA
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Protein sequence | MTDADVTRRR LLQGAAGLTV AAAARPAVAQ SDGPDFGGWF DNVGNYDGVV DETGSDEVTI SVGADANGGA FGFDPAAVEV SPGTTVVWEW TGSGGSHNVV AEDGTFESEL TKESGHTFEY TFEETGTYEY ACTPHRSMGM KGAVVVSEGG GSGTETAQSE ESGGSDPDFG SWFDNVGNYD GVVDETGSDE VTVSVGADAN GGAFGFDPAA VEVSPGTTVV WEWTGSGGSH NVVAEDGTFE SELTKESGFT FEYTFEEAGT YEYACTPHRS MGMKGAVVVS EAGSGASGDG GGGESGGNSG GDPFSPGASA LGISLLIAFL SPLGLAAFLR RRGADEPGSG GRPRSGD
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