Gene Hmuk_2407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2407 
Symbol 
ID8411951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2310235 
End bp2311143 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content68% 
IMG OID645020750 
Product8-oxoguanine DNA glycosylase domain protein 
Protein accessionYP_003178224 
Protein GI257388451 
COG category[L] Replication, recombination and repair 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 
TIGRFAM ID[TIGR00588] 8-oxoguanine DNA-glycosylase (ogg) 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.363205 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGGG GCCAGATAGC GACCGCGAGC CTGCCGGGTG GCGTCGACCT CCAGTCGACC 
GTCGAGAGCG GCCAGTCGTA CCTCTGGGAC CGCTCTGACG GTCGGATGTA CGATCAGGAC
GGCGCACACG GCGGCTCGGC GTGGTACTGG ACGACCGTCA GGGTCGACGG TCGAGCCCAC
GTGATCAGGG TTCGACAGCG AGACGGCCAC CTCGAATGGG AGAGCGACAT CGACGCGACG
CCGCACCTCC GGCGACTGCT CCGACTGGAC GACGACCTCG AAGCGATCCG TGCGACGGCA
CCCGACGACG CCGTCGTTCA GGACGCGTAC GACGAGTACT GGGGGATGCG TCTCGTCCGC
GATCCGCCGT TCGGCTCGCT GATCTCCTTT ATCTGCTCGG CACAGATGCG CGTGGGCCGC
ATCCACGGGA TGCAACAGGC GCTGCGCGAG ACGTACGGCG ATCCGGTCAC GTTCGACGGC
GAGACCTACC ACGCGTACCC GACGCCCGAA CAGCTGGCAG CGACGACGGA GGCGGCGCTG
CGAGACCTCG GGCTGGGCTA CCGCGCGCCG TACGTCCTGC GGACCGCGAC GATGGTCGCC
GAGGGGAAAG CGGACCCGCA CGCGGCCCGC GAGATGGTCT ACGAGGAGGC TCGCGACCAC
CTCACCCAGT TCGTCGGCGT CGGAGACAAG GTCGCCGACT GCGTGTTACT GTTCTCGCTC
GACTTCCTCC AGGCGGTCCC GCTGGACACC TGGATCAAGA CGACCATCGA GGAGTACTTC
CCGACCGCCG ATCGGGGCAA CTACGCAGAC ACCTCGCGGG CGATCCGTGA GGCGCTGGGC
GGCGAGTACG CCGGCTACGC GCAGACGTAC GTCTTCCATT TCCTCCGCAG CGGCGGCGAG
CCGGCGTGA
 
Protein sequence
MQRGQIATAS LPGGVDLQST VESGQSYLWD RSDGRMYDQD GAHGGSAWYW TTVRVDGRAH 
VIRVRQRDGH LEWESDIDAT PHLRRLLRLD DDLEAIRATA PDDAVVQDAY DEYWGMRLVR
DPPFGSLISF ICSAQMRVGR IHGMQQALRE TYGDPVTFDG ETYHAYPTPE QLAATTEAAL
RDLGLGYRAP YVLRTATMVA EGKADPHAAR EMVYEEARDH LTQFVGVGDK VADCVLLFSL
DFLQAVPLDT WIKTTIEEYF PTADRGNYAD TSRAIREALG GEYAGYAQTY VFHFLRSGGE
PA