| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_2402 |
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| Symbol | |
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| ID | 8411946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halomicrobium mukohataei DSM 12286 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013202 |
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| Strand | + |
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| Start bp | 2305682 |
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| End bp | 2306407 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645020745 |
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| Product | Shwachman-Bodian-Diamond syndrome protein |
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| Protein accession | YP_003178219 |
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| Protein GI | 257388446 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1500] Predicted exosome subunit |
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| TIGRFAM ID | [TIGR00291] rRNA metabolism protein, SBDS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.595665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATATCAC TTGACGAAGC GGTGACGGCG AGACTCGAAT CCCACGGCCA GCGGTTCGAA
GTGCTCGTCG ACCCCGACGC CGCGCTGGCG ATCAAACGCG ACGAGTTCGA CGGGGAACTC
GAAGACGTCA TCGCCGCCGA GGACGTGTTC GAGGACGCCT CTCGCGGCGA CCGACCGCCG
GAGAACTCCC TGACGGAGGT GTTCGACACG ACGGAGCCAC TGGAGATCAT CCCGGAGGTG
ATCAAGCAGG GGGAGATCCA GATCACGGCC GATCAGCGCC GCGAGATGCA AGAACAGAAA
CACCGACAGC TGATCCAGCA GATCACACGC AACGCCGTAA ACCCCCAGAT GGACGACGCA
CCGCACCCGC CAGACCGCAT CGAGTCGGCC CTCGAAGAGA CGGACTTCAG GGTCGATCCG
ATGGAGCCCG TCGACAATCA GGTCGACGAC GCGCTGGACG CGCTCCGACC CGTGATCCCG
ATCCGCTTCG ACGAGGTGAC CGTCGCGGTC CAGGTCCCCG CGGACTACGC CGGTGCCGCC
CAGTCTCGCA TCCGGCAGTT CGGCGACCTC GAACGCGAAG AGTGGCAGGC AGACGGCTCC
TGGATCGGCG TCATCACCTT CCCCGCCGGG ATGCAAAACG AGTTTTACGA CGTGGTCAAC
GAACACACGA GCGGCGAGGC CGAGACCCAG ATCGTCAAAG ACGAAGACGA GATCTCGATC
CGCTGA
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| Protein sequence | MISLDEAVTA RLESHGQRFE VLVDPDAALA IKRDEFDGEL EDVIAAEDVF EDASRGDRPP
ENSLTEVFDT TEPLEIIPEV IKQGEIQITA DQRREMQEQK HRQLIQQITR NAVNPQMDDA
PHPPDRIESA LEETDFRVDP MEPVDNQVDD ALDALRPVIP IRFDEVTVAV QVPADYAGAA
QSRIRQFGDL EREEWQADGS WIGVITFPAG MQNEFYDVVN EHTSGEAETQ IVKDEDEISI
R
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