Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_2378 |
Symbol | |
ID | 8411921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 2287013 |
End bp | 2288614 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645020722 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_003178197 |
Protein GI | 257388424 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.899046 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTGCGTCG TCGGTGCGGG GCCGGCCGGC GCGCTCGTGG CCCATCGGCT CGCCAGCGCC GGCCACGACG TGGTCGTACT GGAGGCGGGG CCGCGGTTCG ACTTCGACGC GCGGCCCGAG CAGATGGAGC GGTCGATCCG GCCGGCCCAC GACGACCTGT CGATCTGGGG GATGGGCGGC GAGCGCGACG AGTACTCGAC GGGCGGCGAG CAGTTCTACC CGCTGAACGC CAACCGCGTC AAGGGTGTCG GCGGATCGAC GCTTCACTGG CAGGGGATGG TCCCGCGGCT CCATCCGACA GACTTCGCCG GTGAGCACCC GAACGACGAT CCGGGCTGGC CGATCGGCTA CGAGGAACTC CGACCCTACT ACGCCGAGGC GGAGTCGGCG CTGGGCGTCG CGGGGGCGTC TGACAACCCC TTCGGACCGC CACGGCGAAC GCCATTCCCC ATGTCGGCGT TCGAGCCGTC GTACAGCGAC TCGCTGTTTG CACCCGCCTG CGAGCGGCTC GGTATCACGA CCCACAGCGT GCCCAACGCC CGCAACAGCG AGCCCTACGA CGACAGATCG ACCTGCGTCG GCTACGGTAC CTGTCAGCCG GTCTGTCCCT CCGGCGCGAA GTACAGCGCC GACACTCACG TCCAGAAGGC CGAGCGCGCG GGTGCCCGAG TCGTCGACCG CGCGCCGGTC CAGCGACTGG AGACCGGTGA CGATTCCCGT CGGATCGACG CCGCGGTGTA CGCGACGCCG GACGGGACCG AACACCGCCA GCGGGCTCGC CAGTTCGTGC TGGCGGCCGG CGGGATCGAG ATTCCGCGGC TCCTCTTGCT GTCTCGCTCG CCCGACCATC CCGACGGGCT GGCGAACAGT TCGGGCGCGG TCGGCCGGTA CTTCATGGAG CACCTCTTTG CCGGGGCCGG CGGGACGATC GACGAGCCGA CCCGCCAGAA CCACGTCGGT TTCCTCACCA GCGAGAGCCA CCAGTTCTAC GACGAGCCCG GACAGGCGGT CACCAGAGAC GGCGAGACGG TGGTGCCGGC CGCCGACGGC CCGCTGTCGC CGATCAAACT GGAGTTTCTC AACTACGCCG GCCCGTCGCC CGTCGAGATG GCGCTAGACG CCGAGACGTG GGGTGACGAC CTGCTCGACG ACCTCCGGGC GGGCTACGGG AACCACGTCG CGATGGGGGG GCTCGTCGGC CAGCCCCCGC GGGCCGAGAA CCGGATCACG CTCGACCCGT CGACGACCGA CGACCACGGC AATCCGGTCC CGGAGATCCA CTGGTCGTGG GGTGAGCGCG TGCTCCGAAC GATCGAGCGG GCGAACCGCA TCCAACACGC CGTCCTCTCG GAGCTCGGCG TCGACATCGG CTGGACTGCG GGGCCGGACT CGACCGGTCC CGCCGCCCAC CACATGGGGA CGACGCGGAT GGGGACCGAC CCGGCAGCGA GCGTCGTCGA TCCCGACCTC CGGACCCACG ACCTGGACAA CTGCTGGATC GCGTCGTCGA GCGTGTTCCC GACTGCGGGC TCGATGAACC CGACGCTGAC GATCGCGGCG CTGGCGCTTC GGTGTGGCGA CGAACTCGAC GAACGGCTGT GA
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Protein sequence | MCVVGAGPAG ALVAHRLASA GHDVVVLEAG PRFDFDARPE QMERSIRPAH DDLSIWGMGG ERDEYSTGGE QFYPLNANRV KGVGGSTLHW QGMVPRLHPT DFAGEHPNDD PGWPIGYEEL RPYYAEAESA LGVAGASDNP FGPPRRTPFP MSAFEPSYSD SLFAPACERL GITTHSVPNA RNSEPYDDRS TCVGYGTCQP VCPSGAKYSA DTHVQKAERA GARVVDRAPV QRLETGDDSR RIDAAVYATP DGTEHRQRAR QFVLAAGGIE IPRLLLLSRS PDHPDGLANS SGAVGRYFME HLFAGAGGTI DEPTRQNHVG FLTSESHQFY DEPGQAVTRD GETVVPAADG PLSPIKLEFL NYAGPSPVEM ALDAETWGDD LLDDLRAGYG NHVAMGGLVG QPPRAENRIT LDPSTTDDHG NPVPEIHWSW GERVLRTIER ANRIQHAVLS ELGVDIGWTA GPDSTGPAAH HMGTTRMGTD PAASVVDPDL RTHDLDNCWI ASSSVFPTAG SMNPTLTIAA LALRCGDELD ERL
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