Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_2342 |
Symbol | |
ID | 8411883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 2255030 |
End bp | 2256238 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645020685 |
Product | glucose sorbosone dehydrogenase |
Protein accession | YP_003178161 |
Protein GI | 257388388 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.00995217 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACG AGACGACAGC AGTCACGCGG CGTCGTTCGA TGCTGGCCAC GATCGCTACC GGCCTCGGCG GCCTCGTGGC CGGCTGTGAC GGGCGGTCGG TCGGACAGCG ATCACCGACC GAGACCGACG ACGACGCCGG GGTCGCCGTC GATCGCGTCG CGGAGTCGTT CACGGCTCCG TGGAGCGTCA CACCGTTGCC CTCGGGCGAT CGGTTGCTCG TGACCGAACG GCCGGGTCGG CTCTGGCTGG TGTCGCTGCC GGACGGCGAG AAGAGCGAAC TGACCGGCGT GCCGTCGGTC CACGCTCGGG GGCAGGGCGG CTTGCTCGAC AGCGAACTCC ACCCCGAGTT CGAGGAGACG CCGTGGGTGT ACCTGACCTA CGCCAGCGCG AACGACGGCG GAGAGTCGAC GACGGCGCTG GCTCGCGGAC GGCTGAACGT CGACAGCGGC TCGCTCGAAG CGGTCGAGCG GCTCCACGTC GCCGAGCCCT TCGTCGAGTC GAACGGCCAC TTCGGCTCCC GGGTCGCTTT CGGCCGGGAC GGCACAGTCT ACCAGACGGT CGGTGATCGA CAGTTCAAGG ACTTCGGCCC CCAGCACGTC GCCCAGGACC TGACGACGGA ACTCGGTGTG ACGCTGCGCC TCGAACCCGA CGGCTCGGTC CCGGACGACA ATCCGTTCGT CGACGAGCCG GCGGCCGCCG ACGCCGTCTA CAGCTACGGC CACCGCAACG CCCAGGGCAT GGCCGTCCAT CCCGACACCG GCGCGATCTG GCAGAGCGAG TTCGGGGAGC AGGACGGCGA CGAGATCAAC GTCCTCCGGC CCGGGGGCAA CTACGGGTGG CCCGTCGCCG ACGAAGGCTG TACGTACGGT TCGGGCGATC CCATCGGCGT GGCACACGCG GACCGCGACG ACGTGGTCGG GCCGGTCTAC TCCTGGCCCT GCGGGAGCGG TGGCTTCCCA CCCAGCGGAA TGACGTTCTA CACCGGCGCG GCGTTCCCGG AGTGGGACGG CGATCTGTTC GTCGGCGGGC TGGCCTCGCA GTCTCTCGCT CGCTTCACCG TCGACGGCAC CGACGTGACC GAGGCCGAGC AGTTGCTGTC GGGACGCGGG TGGCGAATCA GAGACGTGGC ACAGGGAGTC GAGGACGGAC ACCTCTACGT GGCCGTCGAC GCCGACGACG CGCCGATCGT GCGCCTCTCG CCTGCGTGA
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Protein sequence | MTDETTAVTR RRSMLATIAT GLGGLVAGCD GRSVGQRSPT ETDDDAGVAV DRVAESFTAP WSVTPLPSGD RLLVTERPGR LWLVSLPDGE KSELTGVPSV HARGQGGLLD SELHPEFEET PWVYLTYASA NDGGESTTAL ARGRLNVDSG SLEAVERLHV AEPFVESNGH FGSRVAFGRD GTVYQTVGDR QFKDFGPQHV AQDLTTELGV TLRLEPDGSV PDDNPFVDEP AAADAVYSYG HRNAQGMAVH PDTGAIWQSE FGEQDGDEIN VLRPGGNYGW PVADEGCTYG SGDPIGVAHA DRDDVVGPVY SWPCGSGGFP PSGMTFYTGA AFPEWDGDLF VGGLASQSLA RFTVDGTDVT EAEQLLSGRG WRIRDVAQGV EDGHLYVAVD ADDAPIVRLS PA
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