Gene Hmuk_2275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2275 
Symbol 
ID8411816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2196942 
End bp2198075 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content68% 
IMG OID645020618 
ProductABC transporter related 
Protein accessionYP_003178094 
Protein GI257388321 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCTG ACATAGACAC GCGCAACACG ACAGCAGCGT TCGACTCGGT CGAATCGGCG 
GTCGACGACC CGTCCGCGAC CGTCGTCGAA CTCGACGGGA TCACCCGCGA GTACGGCGCG
GAGACGGCGG TCGACGACCT CTCGCTGTCG GTCAACGACG GGGAGCTACT GACACTGCTC
GGCCCCTCGG GCTGTGGGAA GACGACGACG CTGCGCATGA TCGCCGGCCT CGAACGCCCT
TCGGGTGGTT CGATCCAGAT CGAGGAGCGG GCCGTCGCCG ACGGATCGAC CTTCCGCAAG
CCCGAAGAGC GAAACGTCGG GATCGTCTTC CAGGACTACG CGCTCTTTCC ACACCTGAAC
GTCGCGGAGA ACATCGCCTT CGGGCTCCGG GACGCCGACA GCCGCGAAGC GGACGAGCGG
GTCACGGAGC TGCTGGAGCT CGTCGATCTC ACCGACCACC GCGAGAAGAT GCCCAGCAAG
CTCTCCGGCG GCCAGCAACA GCGGGTCGCG CTGGCGCGGT CGCTCGCGCC CGAGCCCGAC
GTGTTGCTGC TCGACGAGCC GTTCTCGAAT CTCGACGTGC GCCTCCGGGT CGAGATGCGC
GAGGAGGTCC GGAAGATCCT CAAGCGAGCC GGCGTGACCG CGATCTCGGT CACGCACGAC
CAGGAGGAGG CCCTGTCGAT CTCCGACCGC GTCGCGATCA TGAACGACGG CACGATCGAG
CAGGTGGGCG ACCCCGCCGA GGTCTTCGAG AACCCCGAGT CGCGCTTCGT CGCGAGCTTC
CTCGGGCAGG CGAGTTTCCT CTCTGCCCGC GTGGCCGGCG ACGACATCGA GACCGGGATG
GGGACGTTCA GGACGGCGCG GCTCAACGGC CCCGTCGAGG CGTACAACGG CGCGACCGTC
GACGTGCTCG TCCGGCCCGA CGACCTGCGG GCGATCCCGA CCGCGGAGTC GACCGCCGAC
GGCTACGTCA CGCAGCGCCA GTACAACGGC CCCTCCTTCG TCTACCGGGT GACGCTTCAC
AGCGGCGACG TAGTCCACTG TCTGCACAAC CACAGCGAGT CGTTCGAACC GGGCGAACCG
GTCGAGATCG ACCTGACGGC CGACCACCCG CTGGCCTGGT ACCCCACCGA ATGA
 
Protein sequence
MEPDIDTRNT TAAFDSVESA VDDPSATVVE LDGITREYGA ETAVDDLSLS VNDGELLTLL 
GPSGCGKTTT LRMIAGLERP SGGSIQIEER AVADGSTFRK PEERNVGIVF QDYALFPHLN
VAENIAFGLR DADSREADER VTELLELVDL TDHREKMPSK LSGGQQQRVA LARSLAPEPD
VLLLDEPFSN LDVRLRVEMR EEVRKILKRA GVTAISVTHD QEEALSISDR VAIMNDGTIE
QVGDPAEVFE NPESRFVASF LGQASFLSAR VAGDDIETGM GTFRTARLNG PVEAYNGATV
DVLVRPDDLR AIPTAESTAD GYVTQRQYNG PSFVYRVTLH SGDVVHCLHN HSESFEPGEP
VEIDLTADHP LAWYPTE