Gene Hmuk_2258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2258 
Symbol 
ID8411799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2177716 
End bp2178831 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content68% 
IMG OID645020601 
Productoxidoreductase domain protein 
Protein accessionYP_003178077 
Protein GI257388304 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0680457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.675266 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACTCG ACATCGGCAT TCTGGGCTAT CGGTTCATGG GCAAGGCCCA CTCGAACGCG 
CTCGACCGCC TGCCCATGTT CTTCGAGGAC GCACCGCAGA CGAATCGAGA CGTGCTGGTG
GGCCGCGACG AGGCGGCGCT CGCGGACGCC GCCGACACGC TCGGCTTCGA CCGGACCGCC
ACTGACTGGC GCGAGGTCGT CGACGAGGTC GACGCGTTCT ACAACCTCGG ACCGAACCAC
GTCCACGCCG AGCCCTCGAT CGCGGCACTG GAAGCGGGCA CGCCGGTCCT CTGTGAGAAG
CCCCTCGCGC CCACGCTCGC CGGGGCCGAG GAGATGGCCG ACGCCGCCAG CGAAGCGGGC
GTCACCGCCG GCACGGCCTT CAACTACCGG TTCGTACCGG CACTCCAGTA CGCGCGGAAC
CTGATCGACG ACGGCGAACT CGGCGAGATC CACCACTTCC GCGGACGCTA TCTCCAGGAC
TGGCTCGTCG ATCCCGAGGC CCCCTGGAGC TGGCGCAACG ACGCGGAGAT GGCCGGCAGC
GGCGCGCTGG GCGATCTCGG TGCCCACACC GTCGACCTCG CGCACTTCCT GCTCGGCGAC
ACCGCGGGCG ACATCGAACG GCTCAGCGGA CACCTCCGGA CGTTCGTCGA CGAGCGCCCG
GTCGAAGCAA GCGAGGGCGA GACTCGTCCG GTCACCGTCG ACGACGCTTA CAGCGCCCAG
GTCGAGTTCG AGTCGGGCGC GATGGGCACG CTGGAGGGCT CGCGCTTCTC GAACGGTCAC
AAGAACGACC ACACGATCGA GATCGAGGGC TCGGAGGGCA GCCTGCGGTT CTCTCTCGAA
CGGCTCAACG AACTGGAGCT CAAACGCGGG GACAATCGCG GCTTCGAGAC GATCCTGGTG
ACTGACGCCG ACGACCCCTA CGTCGAGCAC TGGTGGCCGC CGGGTCACGT CATCGGCTGG
GAACACACCT TCGTCCACGA GAACTACGAG TTCCTCACCG CCGTCCGGGA CGGCACCGAC
TACGAACCGA GCTTCGAGGA CGGGCTCCGC GCCCAGCGGG TCCTCGACGC GATCGAGCGC
AGCGACGAGC TCGGGGAGTG GGTGAGCGTC GAATGA
 
Protein sequence
MTLDIGILGY RFMGKAHSNA LDRLPMFFED APQTNRDVLV GRDEAALADA ADTLGFDRTA 
TDWREVVDEV DAFYNLGPNH VHAEPSIAAL EAGTPVLCEK PLAPTLAGAE EMADAASEAG
VTAGTAFNYR FVPALQYARN LIDDGELGEI HHFRGRYLQD WLVDPEAPWS WRNDAEMAGS
GALGDLGAHT VDLAHFLLGD TAGDIERLSG HLRTFVDERP VEASEGETRP VTVDDAYSAQ
VEFESGAMGT LEGSRFSNGH KNDHTIEIEG SEGSLRFSLE RLNELELKRG DNRGFETILV
TDADDPYVEH WWPPGHVIGW EHTFVHENYE FLTAVRDGTD YEPSFEDGLR AQRVLDAIER
SDELGEWVSV E