| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_2255 |
|---|
| Symbol | |
|---|
| ID | 8411796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | + |
|---|
| Start bp | 2174156 |
|---|
| End bp | 2175721 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 645020598 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_003178074 |
|---|
| Protein GI | 257388301 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.626762 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACCGT ACATCACTTT ATACTCCACG ATGTATGTGA CACAAGACCA TGTGTCGGGC
CGAGGGAACC CTCTCGAAAA CGTGTTACCC ATGATGAACG AACTCACTTC GAAACGGGGT
GTTGCATTCG CCATCGGCGG ACAGTTCTGT CACGCACTGT ATCAGATACT CCTCGCCGCC
GTCGCACCGA GCGGTCTGTA CGTCCCACTG GCGGTGCTTG GCGTCGTCGC TGCCGGCGGG
GGTGGCGTCT ACTCCGTCCG GCAACTGTCC GGACGGCTGC ACGATCTGAC CGACGAGGTC
GAGGCTCTCA GGGCCGAAAC GGAGGCGATC GAATCACGCC GGTCGACGCT CGAAGCGGAG
CTACAGTCGA TCCGAGACGA GCTCGAAACG GCTCGCTCCT CGCTTCCAGA GACCGCGGGC
GAGGCGGCCG CTACGCCCGA CGGCGGCGTC GCCGCACAGA ACGCCGCGAC GATCGAAGAA
CTGGACGATT ACATCGCCCG CAGCTGCGAG ATCCTCGACG CCGCCAGTGA GGGGCGGCTC
GGACAGCGAA TGGCGACGGA TACGCCGTCG GACGCGCTGA ACGAACTGGG GGTGGAGTAC
AACGAGATGG CCCAGACGTT CGAGCAGACG ATCCGTGCCG GCGGCGACTT CGCCGGAGAC
GTGGCCGGCT CCAGCGAGCA GGTCACCGCG GCGACGCAGG CGGTCAAGGA CGCGAGCAGC
AACGTCGCGG AGTCGGTCCA GGAGATCGCC GACGTATTCT ACGAACAACA CGAGCAGATC
TCACAGATCA GCGACGAGAT GGGCGAGATG TCGGCCACGA TCGAGGAGAT CGCGGCCTCC
TCGAACGAGG TCGCCGAGAT GGCCGACAAG ACCGAAAAGC GCACCGTCGA GGGGATCGAG
TCCGGGCGCG AGGCCCGGGA AGCGATGGAC GAGACCACGG AGCGAACGGA GGACGTGGTC
GAGTCGATCG AGGAGCTCAA CGATCAGATG GACGAGGTCG GCCAGATCGT CGACCTCATC
GACGACATCG CCGAGCAGAC CAACATCCTC GCACTGAACG CCTCGATCGA GGCCGCACAC
GCCTCTTCGG GAGCGAACAA CAACGGGTTC GGCGTCGTCG CAGACGAGGT CAAGTCCCTG
GCAGAACAGA CCAAAGACGC GACCAACCAG ATCGAGAGCC TGATGGACGA GATTCAGGAC
CAGACCGAGC AGGCGGCCGA CGAGATCCAG GCGATGCAGG GCTCCGTCGA GAAGGGGCGG
ACGACCGTCG AGCAGAACCT CGAATCGCTG GAGTCGATCA TGGAGCACGT CCAGCGGACC
TCCAGCGGCG TCAAGGAGAT CAGCGACGCG TCCGACGACC AGGCCGCCAG CTCGGAAGAG
GTCGCGTCCA TCGCCGACGA CGCCGCCGAA ACGTCCCGCG AGAACGTCGA AGAGGCCGAA
CACGTCGCCG CCGTCGCCGA AGAGCAGAAC CTCGCGCTCG GCGAGATGTA CGTCAACGTC
AAGATGCTGT CCATGCGCTC TCAGCAGCTC TCGACGCTGT TCGATCGCTA CTCCATCGAG
GAGTGA
|
|---|
| Protein sequence | MGPYITLYST MYVTQDHVSG RGNPLENVLP MMNELTSKRG VAFAIGGQFC HALYQILLAA
VAPSGLYVPL AVLGVVAAGG GGVYSVRQLS GRLHDLTDEV EALRAETEAI ESRRSTLEAE
LQSIRDELET ARSSLPETAG EAAATPDGGV AAQNAATIEE LDDYIARSCE ILDAASEGRL
GQRMATDTPS DALNELGVEY NEMAQTFEQT IRAGGDFAGD VAGSSEQVTA ATQAVKDASS
NVAESVQEIA DVFYEQHEQI SQISDEMGEM SATIEEIAAS SNEVAEMADK TEKRTVEGIE
SGREAREAMD ETTERTEDVV ESIEELNDQM DEVGQIVDLI DDIAEQTNIL ALNASIEAAH
ASSGANNNGF GVVADEVKSL AEQTKDATNQ IESLMDEIQD QTEQAADEIQ AMQGSVEKGR
TTVEQNLESL ESIMEHVQRT SSGVKEISDA SDDQAASSEE VASIADDAAE TSRENVEEAE
HVAAVAEEQN LALGEMYVNV KMLSMRSQQL STLFDRYSIE E
|
|---|
| |