| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_2254 |
|---|
| Symbol | |
|---|
| ID | 8411795 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 2172817 |
|---|
| End bp | 2174103 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645020597 |
|---|
| Product | Mandelate racemase/muconate lactonizing protein |
|---|
| Protein accession | YP_003178073 |
|---|
| Protein GI | 257388300 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.967336 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.603396 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATATC TTTTTAGGGG TCAGTCGGAA CGTTCGGACA TGGGAAACGA CATCGATTAC
GCGGATCTGC ACGACCCGAA CGCGGAGTAC ACGATGCGAG AGCTGTCCGC CGAGACGATG
GGCGTCACCG CCAAACGCGG CGGCGGCCGT GACGTCGAGA TCACGGACGT TCAGACGACG
ATGGTCGACG GCAACTTCCC GTGGACGCTC GTGCGTATCT ACACCGACGC GGGCGTCGTC
GGCACCGGTG AGGCCTACTG GGGAGCCGGC GTGCCGGAGC TCATCGAACG GATGAAGCCC
TTCGTCATCG GCGAAAACCC GCTGGACATC GACCGCCTCT ACGAGCACCT CATTCAGAAG
ATGTCCGGCG AGGGCTCCGT CGAAGGTATC ACCGTCACGG CCATCGCCGG GATCGAGATC
GCGCTGCACG ACCTCGCCGG CAAGATCCTC GAAGTGCCCG CGTACCAGCT GCTGGGCGGG
AAGTACCGAG ACGAAGTGCG CGTCTACTGT GACTGTCACA CCGAGGAAGA GGCAGACCCG
GACGCCTGTG CCGACGAGGC CCGCCGCGTC GTCGACGAAC TCGGGTACGA CGCCCTGAAG
TTCGACCTCG ACGTGCCCAG CGGCCTGGAG AAAGACCGCG CCAACCGCCA CCTCCGGCCG
GGCGAGATCC GCCACAAGGC CGAGATCGTC GAGAAGGTCA CCGAGGAAGT CAAAGACGAG
GCCGACGTGG CCTTCGACTG CCACTGGACG TTCTCCGGTG GCTCCGGCAA GCGACTGGCC
GACGCCATCG AGGAGTACGA CGTGTGGTGG CTCGAAGACC CCGTCCCGCC GGAGAACCTC
GAAGTTCAGG AAGAGGTCAC CAAGTCCACG AAGACGCCGA TCACCGTCGG TGAGAACCGC
TATCGAGTCA CCGAGGAACG CCGCCTGATC GAGAACCAGG CCGTCGACAT CATCGCGCCC
GACCTCCCGA AGGTCGGCGG CATGCGCGAG ACCCAGAAGA TCGCCGACGC GGCCAACCAG
TACTACATCC CCGTCGCGAT GCACAACGTC TCCTCCCCGA TCGCGACGAT GGCGAGCGCC
CACGTGGGCA CCGCCATCCC GAACTCCCTG GCCGTCGAGT ACCACAGCTA CGAGCTTGGC
TGGTGGGAGG AGCTGGTCGA GGAGTCCGTC ATCGAGAACG GCTACATCGA GATCCCCGAA
GAGCCCGGCC TCGGCCTCAC GCTGGACATG GACGCCGTCG AGGAACACAT GGTCGACGGC
GAGACGCTGT TCGATCCGGC TGAGTAA
|
|---|
| Protein sequence | MEYLFRGQSE RSDMGNDIDY ADLHDPNAEY TMRELSAETM GVTAKRGGGR DVEITDVQTT
MVDGNFPWTL VRIYTDAGVV GTGEAYWGAG VPELIERMKP FVIGENPLDI DRLYEHLIQK
MSGEGSVEGI TVTAIAGIEI ALHDLAGKIL EVPAYQLLGG KYRDEVRVYC DCHTEEEADP
DACADEARRV VDELGYDALK FDLDVPSGLE KDRANRHLRP GEIRHKAEIV EKVTEEVKDE
ADVAFDCHWT FSGGSGKRLA DAIEEYDVWW LEDPVPPENL EVQEEVTKST KTPITVGENR
YRVTEERRLI ENQAVDIIAP DLPKVGGMRE TQKIADAANQ YYIPVAMHNV SSPIATMASA
HVGTAIPNSL AVEYHSYELG WWEELVEESV IENGYIEIPE EPGLGLTLDM DAVEEHMVDG
ETLFDPAE
|
|---|
| |