Gene Hmuk_2248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2248 
Symbol 
ID8411789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2166515 
End bp2168056 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content71% 
IMG OID645020592 
ProductO-succinylbenzoate-CoA ligase 
Protein accessionYP_003178068 
Protein GI257388295 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID[TIGR01923] O-succinylbenzoate-CoA ligase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.2585 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGACGC TGCCCGAGCC CGAGGAGTGG CCAGTCGAGA ACCCGCTCCC CGAACGGTCG 
AACGACCTAT TGTGCGAGCG TGCCAGCGCG ACCCCCGACG CGACGGCACT GATCGACACG
GACGGCGGGG ACACGTGGAC CTACGCGGAG TTCGACAGCC GAGTCGAGGC GTGGCGTGGC
GGGCTGGCGA CGCTGGTCGA CGAGCCAGCG CCCCGGATCG GGCTCGTACT CCCGACGGGA
CCGGCGTTCG CGACGGCGCT GTTCGCGATC GCCCGCCGGA ACGGTGTCGC GGTGCCCCTG
AACGTCCGCG AGGCGACCGA GACCGTCGCC CGCCAGGCCA CCACGGCAGG TGTCGACGCG
GTGCTCTGTT CGCCCGCCAC CGAGTCGACG GCCCGTGCGG TCGCCCCTCC GGAGGCCACC
GTCTGTTCGA TCGGAGAGCC GTCGGCCGGA GACGTACGAC GCCTCGAACC GACCGAGCCC
GCCGGGTCGC CCGCCGAAGC AGACGCCGGT ACCGACCGGC TCGTCCTCTT TACCTCCGGA
ACGACCGGCA CGCCGAAGGG GGTCCGGCTG ACGCGGGGGA ACCTCATCGC CAGCGCCGTC
GGCTCGGCCC ACCGACTCGG CGTCTCTGCG AGCGACCGCT GGCTCGTCTG TCTGCCGATG
TATCACATGG GCGGACTGGC TCCGCTCGTC CGCTCGACGC TGTACGGCAC CACGACGGTG
CTACAGCGGT CGTTCGACCC GGCCGAGACC GCACGCGTCC TCGGGGCGGC GTCGATCACC
GGCGTCTCGC TGGTCCCGAC GATGCTCACG CGGCTCCTCG ACGAGGGGTG GCGGCCGGCC
GACGGGCTCC GGTTCGTCCT GCTGGGCGGG GCTCCCGCAC GGCCGGCGCT GATCGAGCGT
TGCAGGGACG CCGAGGTGCC GGTGTACCCC ACCTACGGAA CGACGGAAAC GGCGTCACAG
ATCACGACCG CGACGCCGTC AGAGGCCTTC GACCAGCCCG AGACCGTCGG GCGACCGCTG
GACGGCACGA CCGTCACCGT CCTGAACGAC GGCGATGCGT GCCGGCCCGG TGAAGTGGGC
GAGCTGGTCG TCTCGGGACC GACAGTGACG CCGGGCTACC TCGACGAGAG CCAGACGGCA
GACGCCTTCG ACGAGCGGGG GTTCCGGACG GGTGATCTGG GCTACCGCGA CGACGACGGT
CGCTGTTTCG TCGTCGGCCG CGTCGACGAC ATGATCGTGA CGGGCGGCGA GAACGTCCGG
CCGGCACGCG TCGCACGCAC CATCGAGCGA CTGCCGGCCG TCGAAACCGC GGCGGTCGTC
GGCGTCCCGG ACGAGGAGTG GGGCCAGCGC GTGGCCGCAG CAGTCGTCCC CGTGACGGAC
GAACTCACGG CCCCTGCGGT GATCGAGGCA GTCGCAGACG ATCTCGCGGA CTTCGCCGTC
CCGAAGACCG TCACGCTGGT CGATGCGCTA CCCAGGACAC AGTCGGGGAC GGTCGACAGA
CAGCAGCTGC GTGACCTGCT CGGCCGGTCG GAAAACGACT AG
 
Protein sequence
MVTLPEPEEW PVENPLPERS NDLLCERASA TPDATALIDT DGGDTWTYAE FDSRVEAWRG 
GLATLVDEPA PRIGLVLPTG PAFATALFAI ARRNGVAVPL NVREATETVA RQATTAGVDA
VLCSPATEST ARAVAPPEAT VCSIGEPSAG DVRRLEPTEP AGSPAEADAG TDRLVLFTSG
TTGTPKGVRL TRGNLIASAV GSAHRLGVSA SDRWLVCLPM YHMGGLAPLV RSTLYGTTTV
LQRSFDPAET ARVLGAASIT GVSLVPTMLT RLLDEGWRPA DGLRFVLLGG APARPALIER
CRDAEVPVYP TYGTTETASQ ITTATPSEAF DQPETVGRPL DGTTVTVLND GDACRPGEVG
ELVVSGPTVT PGYLDESQTA DAFDERGFRT GDLGYRDDDG RCFVVGRVDD MIVTGGENVR
PARVARTIER LPAVETAAVV GVPDEEWGQR VAAAVVPVTD ELTAPAVIEA VADDLADFAV
PKTVTLVDAL PRTQSGTVDR QQLRDLLGRS END