Gene Hmuk_2236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2236 
Symbol 
ID8411776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2155146 
End bp2157128 
Gene Length1983 bp 
Protein Length660 aa 
Translation table11 
GC content65% 
IMG OID645020579 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_003178056 
Protein GI257388283 
COG category[I] Lipid transport and metabolism 
COG ID[COG1022] Long-chain acyl-CoA synthetases (AMP-forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.83669 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTCTCA TGGCTGGGTC AAGAACGGTG CCGTCGTGGC GTGAAGCGGA GCGAGAGTAC 
TCGGACGAAG TCGTCGCCGA CACGACGATC CCGGAGCTGT TCGAGGCCAC CGCACAGCGA
AACGCGGACA GGACCGCCCA GTTGTACAAG GGCGGCACCT ACGACCGCTC GCTGACACCC
GCAGTGATGC CGGCGGCTCC GGACGGAGAC TACGCCTCGA TCACCTACGA CGAGATGCAG
TCGATGGTCC ACAACCTCGC GGCGGGCTTT CGCGAACTCG GCGTCGACCA CGACACTCGC
GTGGGCCTCT TTTCCAGTAC GCGCATGGAG TGGGCGCTGT CCGACTTCGC GGCGCTGGCG
GCCGGCGGCA TCGTCACGAC GGTCTACACC GAGTCCTCCC CGCGTCAGGT CAAGTACCTC
CTGAGCGATC CCGGCGCAGA CGGCGTCGTC GTCGAGAACG AGGCGCTGCT CGACCGGCTT
CTCGAAGTCG AGGATCGACT CGAACTCTCC TTTATCGTCA CCATCGACGA GTACGACACC
GACCGCGACG ACGTGTACAC GCTGGGAGAG CTCCACGAGA TCGGTGCCAA AGCCTACGAC
GACGCTCGTT ACCGGTCCTG GCTCGAAGAG CGCTCTCCGT CGGACCTCGC GAGCCTGATC
TACACGTCCG GGACGACCGG CCAGCCGAAG GGAGTCAAGC TCACCCACAG AAACTTCCGC
TCGAACGTCA ACCAGGTGTA CAAGCGACTC GCGCCCCGCC CCGACAAGGA CCCGGACCAT
CCGACGCTCT CGCCGGGCAC CACTTCGATC TCCTTCCTGC CGCTCGCACA CGTCTTCGAA
CGGCTCGCCG GCCACTTCGT GATGTTCGCC GCGGGCGCGA CGGTCGGCTA CGTCGAGGAT
CCCGACACGC TCGCCGACGA CATCAAGCTG ATCAGGCCCG ACACCGGTGC GAGCGTCCCC
CGCGTCTACG AGCGGATCTT CGATCGAATG CGCGATCAGG CCAGCGAATC GCCGATCAAA
GAGCGCATCT TCGAGTGGTC GACCGACGTG GCCAGGGAGT GGGCCCGGAC CGACGATCCC
GGCCCGCTCT TGGGCCTGAA GCACGCGGTC AGCGACCGGC TGGTGTACAG CCAGCTCAAG
GAGAACCTCG GGGGCAACAT CGAGTTCATG GTCAGTGGCG GCGGCAGCCT CTCGAAGGAG
CTGTGCGAGA CGTTCCTCGG GATGGACCTC ACGATCGTCG AGGGGTACGG CCTCACCGAG
ACCGCACCGG TCGTCAGCGT CAACCCTCCC GAAGACGTGC GACCGGGGAC GATGGGCGTT
CCCGTCGTCG ACGAGGAGGT CAAACTCGAC ACCCACGTCG TCGATCAGGA CGACTTCGAG
ACCAGCCGAG ACGTGGGCGA GTTGCTGGTC CGGGGGCCGA ACGTCGCCGA CGGCTACTGG
AACCGGGAGA AAGAGACCGC CCAGTCCTTC GAGCCCGACG GCTGGTTCCA CACCGGCGAC
ATCGTCGAGC GGACCGAGGA CGACTTCCTG ATCTACCACG ACCGCCTCAA GGAGGTGATC
GTCCTCTCGA CGGGCAAGAA CGTCGCTCCC CAGCCCATCG AGGACGCCTT CTCGACCAGC
GACCGCGTCG CACAGGCGAT GGTCGTCGGC GACGACCAGA AGTTCATCGC GGCGATGTTC
GTCCCGAACT TCGAGCAGTT GCGTCGCTGG GCCGACCGCG AGGGGATCGA CCTGCCCGAC
AGCGAGGCCG AGATGTGTGA CGACGAGCGC GTCCACGCGT GGATCCAGGA GGCCGTCGAC
GAGGTCAACG AGGACCTCGA AAAGGTCGAG ACGATCAAGA AGTTCGTGCT GCTCCCAAGG
GAGTGGACCG CCGAGAACGA CCTCCTGACG CCGTCGATGA AGAAAAAGCG CCGCAACATC
AGGAAGGCCT TCGAGGACCG GCTCTCGGAG ATCTACGAGG ATCCCGTTAC GGTGGACGAC
TGA
 
Protein sequence
MCLMAGSRTV PSWREAEREY SDEVVADTTI PELFEATAQR NADRTAQLYK GGTYDRSLTP 
AVMPAAPDGD YASITYDEMQ SMVHNLAAGF RELGVDHDTR VGLFSSTRME WALSDFAALA
AGGIVTTVYT ESSPRQVKYL LSDPGADGVV VENEALLDRL LEVEDRLELS FIVTIDEYDT
DRDDVYTLGE LHEIGAKAYD DARYRSWLEE RSPSDLASLI YTSGTTGQPK GVKLTHRNFR
SNVNQVYKRL APRPDKDPDH PTLSPGTTSI SFLPLAHVFE RLAGHFVMFA AGATVGYVED
PDTLADDIKL IRPDTGASVP RVYERIFDRM RDQASESPIK ERIFEWSTDV AREWARTDDP
GPLLGLKHAV SDRLVYSQLK ENLGGNIEFM VSGGGSLSKE LCETFLGMDL TIVEGYGLTE
TAPVVSVNPP EDVRPGTMGV PVVDEEVKLD THVVDQDDFE TSRDVGELLV RGPNVADGYW
NREKETAQSF EPDGWFHTGD IVERTEDDFL IYHDRLKEVI VLSTGKNVAP QPIEDAFSTS
DRVAQAMVVG DDQKFIAAMF VPNFEQLRRW ADREGIDLPD SEAEMCDDER VHAWIQEAVD
EVNEDLEKVE TIKKFVLLPR EWTAENDLLT PSMKKKRRNI RKAFEDRLSE IYEDPVTVDD