Gene Hmuk_2207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2207 
Symbol 
ID8411746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2120065 
End bp2121399 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content67% 
IMG OID645020549 
Productaminotransferase class-III 
Protein accessionYP_003178027 
Protein GI257388254 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0160] 4-aminobutyrate aminotransferase and related aminotransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.85237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.53065 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGTG ACAGCGTCGA ACCGACGGTC GGGGACCTCC CCGGCGAACG CGCAAGCGAG 
TGGGTCGAGT ACCACCACGA GCACGCAGCC CCCAGCACCT ACGTCTACGA GTTCGTCTGG
GACCGCGACG CACCGGCGAT CGGTCCCTTC TGTACCGACG TGGACGGCAA CGTCCTGATG
GACTGGACCG GCCACGTCGG CGCGATGCCA CTGGGCTACA ACAACCCCAA AGTCCTCGAT
CCGCTGTCGG CGTTCGACCT CGTCGAGCCC ACGAAGATCG CGGGACAGGA CTTCTACGCG
ACCGGCACCG GCTCGGATCT CCCCGGCGCG GCCGGGCTGA TGGATCGCCT GACGGACATC
TCCAGTCACT ACGGGATGGA CACCGTCTTC CTCTCGAACA GCGGTGCCGA GGCGGTCGAG
AACGCCATCA AGATCAGCTA CGACCACCGC CGGGGCAAGT ACGCGATCAC CTTCGAAGGT
GCCTTCCACG GCCGAACGCT GGGGGCGCTC TCGCTCAACC GCTCGAAGGC GGTGTACCGC
AGACAGTTCC CCGAGATCGC GACGGTCCAC GACGCCCCCT TCTGTGACGA CCGCCACTGC
ACGCCCGAGA GCTGTGACTG TGGCTTCTTC ACGGGCGACG GCTCGGTGCT GGGACGGATG
CTCGACCCCA AGACCGGCCA CGTCGACCCC GACGACGTGT CCTACATCAT CTTCGAGCCG
ATCCAGGGCG AGGGAGGGTA CCGGTTTCCC AGCGACGCCT TCGCGACGGA GATCGCCGAC
ATCGCCGAGC GACACGGCGT ACCGATCGTC GTCGACGAGG TCCAGACCGG TCTGGGGCGC
ACTGGCGAGT GGTGGGGCTC GGATCACTAC CCGTTCGATC CGGACGTGAT CGCCAGCGCG
AAGGCGCTCC GTGTCGGCGC GACCATCGCC AGCGCGGACG TGTTCCCCGA CGAGAAGGGG
CGACTCTCTT CGACGTGGGG AGCTGGAGAC GTGCTCGCGT GCGCCCAGGG CGCGCTCACC
ATCGACGCCA TCGAGGAGTA CGATCTGCTC GACAACGCGA CCGAGCGAGG GCGGGCGTTC
GTCGAGCGGT TCCGCGACGC GACGGCCCAG TCGGCGGCCG TAGAAGACGT TCGCGGCGAG
GGGCTCTTGC TCGCCGTCGA GTTCGACAGC AAGGAACGAC GGGAAGCGGT GATCGAGGCC
GCCATGCAAC GCGGACTGTT GACGCTTGGC TGCGGTCGGA AGACGCTGCG CCTGCTCCCG
CCGCTCGACT CGACGCGCAG GGAGATCGAG TTGGGGTCCG GACTGCTCGC GGATGCCATC
GACGCGGTGG CCTGA
 
Protein sequence
MDRDSVEPTV GDLPGERASE WVEYHHEHAA PSTYVYEFVW DRDAPAIGPF CTDVDGNVLM 
DWTGHVGAMP LGYNNPKVLD PLSAFDLVEP TKIAGQDFYA TGTGSDLPGA AGLMDRLTDI
SSHYGMDTVF LSNSGAEAVE NAIKISYDHR RGKYAITFEG AFHGRTLGAL SLNRSKAVYR
RQFPEIATVH DAPFCDDRHC TPESCDCGFF TGDGSVLGRM LDPKTGHVDP DDVSYIIFEP
IQGEGGYRFP SDAFATEIAD IAERHGVPIV VDEVQTGLGR TGEWWGSDHY PFDPDVIASA
KALRVGATIA SADVFPDEKG RLSSTWGAGD VLACAQGALT IDAIEEYDLL DNATERGRAF
VERFRDATAQ SAAVEDVRGE GLLLAVEFDS KERREAVIEA AMQRGLLTLG CGRKTLRLLP
PLDSTRREIE LGSGLLADAI DAVA