Gene Hmuk_2189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2189 
Symbol 
ID8411728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2102634 
End bp2104760 
Gene Length2127 bp 
Protein Length708 aa 
Translation table11 
GC content66% 
IMG OID645020531 
ProductFibronectin-binding A domain protein 
Protein accessionYP_003178009 
Protein GI257388236 
COG category[K] Transcription 
COG ID[COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCACA AGCGGGAGCT GACGAGCGTC GACCTCGCCG CCCTCGAACG GGAGCTGGGC 
GGCTACGAGG GGGCCAAGCT CGACAAGGCG TACCTCTACG AGGACGACCT CCTGCGGCTC
AAGATGCGGG ACTTCGACCG CGGGCGGGTG GAGCTGCTGA TCGAGGTCGG CGAGAACAAG
CGCGCCCACG TCGTCGACGC CGACCACGTC CCCGACGCGC CGGGCCGACC GCCCAACTTC
GCGATGATGC TTCGCAATCG GATCTCGGGC GGCGAGCTGG CCGACGTGCG CCAGTTCGAG
TTCGACCGGA TCATGGAGTT CGAGTTCGAC CGTCCCGACG CCTCCACCAC GGTCGTCGCG
GAGCTGTTCG GCGACGGCAA CGTCGCGGTG CTCGACGAAC ACGGCGAGGT CGTCGACTGC
CTGGAGACGG TCCGACTCAA GTCACGCACC GTCGCGCCGG GCAGCCAGTA CGAGTTCCCG
TCGGCGCGGT TCAATCCGCT GACCGTCGAC TACGAGACGT TTCTGGAGCG GATGCGCCAG
TCCGACGCCG ACGTGGTACG GACGCTCGCG ACCCAGCTGA ACTTCGGGGG GCTCTACGGC
GAGGAGCTGT GTACGCGGGC CGGGATTCCG TACAACCAGG CCATCGGAGA CACCGACGAA
GCTGAGTTCG AGCGGCTGTA CGAGGTGATC GCCGATCTGA AAGCGCGGCT CCGCAGCGGC
GACCTCGATC CGCGCGTCTA CTACGAGTAC GAAGAGATCG AGGGCGAGGA GATCGAGCGT
CGCGTGGACG TGACGCCGAT TCCCCTCGAA GAGTACGACG ACGTAGAGAG CCGTGCCTTC
GAGACCTTCA CCGAGGCGCT GGACGAGTAC TTCTACGAGG TCGAACGGGA GGACACGGCC
GAGGAGATCG CCGACGCGGG CGTCGACCGG CCGGACTTCG AGAGCGAGAT CGAGAAGTAC
GAGCGCATCA TCCAGCAACA GCAGAGCGCG ATCGAGGACT TCGAGTCCGA CGCCGAGGCC
GAGCGCGAGA AGGCGGAGTT GCTGTACGCT CGCTACGACC TCGTCGACGA GATCCTCTCG
ACGATTCAGG GCGCGCGAAC CCAGGACACG CCGTGGGACG AGATCGAGGC GACCTTCGAG
GAGGGCAAAG AGCAGGGCAT CGCCGCGGCC GAGGCCGTCG AGGGCCTCGA CGGCAGCGAG
GGGACGGTGA CCCTGTCGAT CGACGACGTG CGCGTGACGA TCGACGCGAC GATGGGCGTC
GAGAAGAACG CCGACCAGCT CTACCAGGCG GCAAAGCGCA TCGAGGAGAA GAAAGAGGGC
GCGCAGGCGG CGATCGAAGA CACGCGAGAG GATCTCGAAG CGGTCGAGCG ACGCCGCGAG
AACTGGGAAG CCGAGGACAC GACGGAGACC CAGGAGCAGA CGGCGGAAGC AGACGACGTC
GACTGGCTCT CGCGGGCGTC GATTCCGGTC CGGAGACAGG AGCCGTGGTA CGATCGCTTC
CGGTGGTTCC GCACCTCGAA CGGCTTCCTC GTGATCGGCG GCCGTAACGC CGATCAGAAC
GAGGAACTGG TCAAGAAGTA CCTCGACCGC GGAGACAAGT TCTTCCACGC ACAGGCACAC
GGCGGTCCCG TGACCGTCCT GAAGGCGACC GGTCCCAGCG AGTCCAGCCG CGACGTGGAC
ATCCCGGACC AGGACAAACG TGAAGCGGCG ACGTTCGCAG TGGCGTACTC GTCGGTGTGG
AAGGACGGCA AGTACGCCGG TGACGCGTAC ATGGTCGATC CCGACCAGGT ATCGAAGACT
CCAGAGAGCG GCGAGTACCT GGAGAAGGGG GGGTTCGCGA TTCGAGGCGA CCGGACGTAC
TTCCGGGACC TCGAAGTCGA CGTGGCCGTC GGGATCTCCT GTGAGGACTG GACCGGCGTT
CTCGGTGGCC CGCGATCGGC CGTCGAGGAT CGCGTCGCGA CCAGTATCGA GATCGAACCC
GGCCAGTACG CACAGAACGA CATCGCGAAG CGGCTGTACC GGGAGTTCAA AGAGCGGTTC
GAAGACGAGT CGTTCGTCCG CAAGGTCGCC AGCCCGGACC TGATCCAGGA GTTCCTCCCG
CCGGGCGGCA GTCGGATGGT CGAGTGA
 
Protein sequence
MDHKRELTSV DLAALERELG GYEGAKLDKA YLYEDDLLRL KMRDFDRGRV ELLIEVGENK 
RAHVVDADHV PDAPGRPPNF AMMLRNRISG GELADVRQFE FDRIMEFEFD RPDASTTVVA
ELFGDGNVAV LDEHGEVVDC LETVRLKSRT VAPGSQYEFP SARFNPLTVD YETFLERMRQ
SDADVVRTLA TQLNFGGLYG EELCTRAGIP YNQAIGDTDE AEFERLYEVI ADLKARLRSG
DLDPRVYYEY EEIEGEEIER RVDVTPIPLE EYDDVESRAF ETFTEALDEY FYEVEREDTA
EEIADAGVDR PDFESEIEKY ERIIQQQQSA IEDFESDAEA EREKAELLYA RYDLVDEILS
TIQGARTQDT PWDEIEATFE EGKEQGIAAA EAVEGLDGSE GTVTLSIDDV RVTIDATMGV
EKNADQLYQA AKRIEEKKEG AQAAIEDTRE DLEAVERRRE NWEAEDTTET QEQTAEADDV
DWLSRASIPV RRQEPWYDRF RWFRTSNGFL VIGGRNADQN EELVKKYLDR GDKFFHAQAH
GGPVTVLKAT GPSESSRDVD IPDQDKREAA TFAVAYSSVW KDGKYAGDAY MVDPDQVSKT
PESGEYLEKG GFAIRGDRTY FRDLEVDVAV GISCEDWTGV LGGPRSAVED RVATSIEIEP
GQYAQNDIAK RLYREFKERF EDESFVRKVA SPDLIQEFLP PGGSRMVE