Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_2189 |
Symbol | |
ID | 8411728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 2102634 |
End bp | 2104760 |
Gene Length | 2127 bp |
Protein Length | 708 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 645020531 |
Product | Fibronectin-binding A domain protein |
Protein accession | YP_003178009 |
Protein GI | 257388236 |
COG category | [K] Transcription |
COG ID | [COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCACA AGCGGGAGCT GACGAGCGTC GACCTCGCCG CCCTCGAACG GGAGCTGGGC GGCTACGAGG GGGCCAAGCT CGACAAGGCG TACCTCTACG AGGACGACCT CCTGCGGCTC AAGATGCGGG ACTTCGACCG CGGGCGGGTG GAGCTGCTGA TCGAGGTCGG CGAGAACAAG CGCGCCCACG TCGTCGACGC CGACCACGTC CCCGACGCGC CGGGCCGACC GCCCAACTTC GCGATGATGC TTCGCAATCG GATCTCGGGC GGCGAGCTGG CCGACGTGCG CCAGTTCGAG TTCGACCGGA TCATGGAGTT CGAGTTCGAC CGTCCCGACG CCTCCACCAC GGTCGTCGCG GAGCTGTTCG GCGACGGCAA CGTCGCGGTG CTCGACGAAC ACGGCGAGGT CGTCGACTGC CTGGAGACGG TCCGACTCAA GTCACGCACC GTCGCGCCGG GCAGCCAGTA CGAGTTCCCG TCGGCGCGGT TCAATCCGCT GACCGTCGAC TACGAGACGT TTCTGGAGCG GATGCGCCAG TCCGACGCCG ACGTGGTACG GACGCTCGCG ACCCAGCTGA ACTTCGGGGG GCTCTACGGC GAGGAGCTGT GTACGCGGGC CGGGATTCCG TACAACCAGG CCATCGGAGA CACCGACGAA GCTGAGTTCG AGCGGCTGTA CGAGGTGATC GCCGATCTGA AAGCGCGGCT CCGCAGCGGC GACCTCGATC CGCGCGTCTA CTACGAGTAC GAAGAGATCG AGGGCGAGGA GATCGAGCGT CGCGTGGACG TGACGCCGAT TCCCCTCGAA GAGTACGACG ACGTAGAGAG CCGTGCCTTC GAGACCTTCA CCGAGGCGCT GGACGAGTAC TTCTACGAGG TCGAACGGGA GGACACGGCC GAGGAGATCG CCGACGCGGG CGTCGACCGG CCGGACTTCG AGAGCGAGAT CGAGAAGTAC GAGCGCATCA TCCAGCAACA GCAGAGCGCG ATCGAGGACT TCGAGTCCGA CGCCGAGGCC GAGCGCGAGA AGGCGGAGTT GCTGTACGCT CGCTACGACC TCGTCGACGA GATCCTCTCG ACGATTCAGG GCGCGCGAAC CCAGGACACG CCGTGGGACG AGATCGAGGC GACCTTCGAG GAGGGCAAAG AGCAGGGCAT CGCCGCGGCC GAGGCCGTCG AGGGCCTCGA CGGCAGCGAG GGGACGGTGA CCCTGTCGAT CGACGACGTG CGCGTGACGA TCGACGCGAC GATGGGCGTC GAGAAGAACG CCGACCAGCT CTACCAGGCG GCAAAGCGCA TCGAGGAGAA GAAAGAGGGC GCGCAGGCGG CGATCGAAGA CACGCGAGAG GATCTCGAAG CGGTCGAGCG ACGCCGCGAG AACTGGGAAG CCGAGGACAC GACGGAGACC CAGGAGCAGA CGGCGGAAGC AGACGACGTC GACTGGCTCT CGCGGGCGTC GATTCCGGTC CGGAGACAGG AGCCGTGGTA CGATCGCTTC CGGTGGTTCC GCACCTCGAA CGGCTTCCTC GTGATCGGCG GCCGTAACGC CGATCAGAAC GAGGAACTGG TCAAGAAGTA CCTCGACCGC GGAGACAAGT TCTTCCACGC ACAGGCACAC GGCGGTCCCG TGACCGTCCT GAAGGCGACC GGTCCCAGCG AGTCCAGCCG CGACGTGGAC ATCCCGGACC AGGACAAACG TGAAGCGGCG ACGTTCGCAG TGGCGTACTC GTCGGTGTGG AAGGACGGCA AGTACGCCGG TGACGCGTAC ATGGTCGATC CCGACCAGGT ATCGAAGACT CCAGAGAGCG GCGAGTACCT GGAGAAGGGG GGGTTCGCGA TTCGAGGCGA CCGGACGTAC TTCCGGGACC TCGAAGTCGA CGTGGCCGTC GGGATCTCCT GTGAGGACTG GACCGGCGTT CTCGGTGGCC CGCGATCGGC CGTCGAGGAT CGCGTCGCGA CCAGTATCGA GATCGAACCC GGCCAGTACG CACAGAACGA CATCGCGAAG CGGCTGTACC GGGAGTTCAA AGAGCGGTTC GAAGACGAGT CGTTCGTCCG CAAGGTCGCC AGCCCGGACC TGATCCAGGA GTTCCTCCCG CCGGGCGGCA GTCGGATGGT CGAGTGA
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Protein sequence | MDHKRELTSV DLAALERELG GYEGAKLDKA YLYEDDLLRL KMRDFDRGRV ELLIEVGENK RAHVVDADHV PDAPGRPPNF AMMLRNRISG GELADVRQFE FDRIMEFEFD RPDASTTVVA ELFGDGNVAV LDEHGEVVDC LETVRLKSRT VAPGSQYEFP SARFNPLTVD YETFLERMRQ SDADVVRTLA TQLNFGGLYG EELCTRAGIP YNQAIGDTDE AEFERLYEVI ADLKARLRSG DLDPRVYYEY EEIEGEEIER RVDVTPIPLE EYDDVESRAF ETFTEALDEY FYEVEREDTA EEIADAGVDR PDFESEIEKY ERIIQQQQSA IEDFESDAEA EREKAELLYA RYDLVDEILS TIQGARTQDT PWDEIEATFE EGKEQGIAAA EAVEGLDGSE GTVTLSIDDV RVTIDATMGV EKNADQLYQA AKRIEEKKEG AQAAIEDTRE DLEAVERRRE NWEAEDTTET QEQTAEADDV DWLSRASIPV RRQEPWYDRF RWFRTSNGFL VIGGRNADQN EELVKKYLDR GDKFFHAQAH GGPVTVLKAT GPSESSRDVD IPDQDKREAA TFAVAYSSVW KDGKYAGDAY MVDPDQVSKT PESGEYLEKG GFAIRGDRTY FRDLEVDVAV GISCEDWTGV LGGPRSAVED RVATSIEIEP GQYAQNDIAK RLYREFKERF EDESFVRKVA SPDLIQEFLP PGGSRMVE
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