Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_2148 |
Symbol | |
ID | 8411687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 2058515 |
End bp | 2061010 |
Gene Length | 2496 bp |
Protein Length | 831 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 645020490 |
Product | type II secretion system protein E |
Protein accession | YP_003177968 |
Protein GI | 257388195 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0453138 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATTG ATGACACGGG GGAGAGCCGG TCCGAGGTCA CTCGGGGGGA GGTGACCGAG GATCCGCCGG CCATCGTCGG TGAGTACACC TGGGAAGATC TTCGGCGGGA CCACCACAGC GGGGGTCGGT TCGATCGAAG CCAGTATCTG GGCTTCGACC CGAACGACAT CGAATCGGTA CTGACAGATG CCGCGAGCAA CGCCAAGACG CTGAAACAGC CCTTCGACGC CTACGTCGAT CCGGCGGCGA CGCCGGTCGC GAAAGGGGTC TACACGTGGG AACACTTCAA GCAAGAGTAC TACTACGAGG AAGACAGTAC GCCGCCGACG GACGGCGACG GCGAGAAGAT CCCGTTCGAC CCCGCCGAGT ATCTGGGCTT CGAGCCCGAG GAAGTCGAGA GCGAACTGTC GGCGGCCGAC GGGGCCGCAG AGCTACTCGA CAACCTCGTC GAGCAGCGAA CCGTCGACGT CAATCCGGAA CTGGACGAAG ACGCCTTCTT CTCGACACAG GACGGTCACA CGACCGTCGT CAACCGCTAC GATCTGGAGA AGGCCGTCCC GCTGAAGAAG AAGACGCACT TCACGGAGAT CGAGCGCTAC TGGGTCAACA AACCCTACGC CTGCGTGATC ATCTTCCACT CTCGGAAGGA AAACGAGAAG AAGTACTACG TCGTCGAGCC CTACCACAAC GAGATCGAGG ACGATCTCAA GGGATTCCTC TCGAACAAGC TGAAGACCGC GATCAAGTAC TCCGAGGACG ACGTGATCGT ACAGGGGTCG GAGGCCGACC GGGCCGACGT GATCCAGCGG GAAGCCGAGC AGCTGCTGAA CCGCTACGAT CTGTACAGCG GCCCCGTGGG TAGCGCCGAA CCCGGAGTGC TCGATCAGTT CAAAGAGTTC CTGGGCATGG AGGTCGAAGC CCAGGCAGTC GGGACCGGCC AGCTCGACGG CATCAGTGCC CGGCCCGAGC CGGCCGTCCT CGAAGACGAC CCCGAGCAAC TCTCCGAGTA CCAGGTCGAG AAGCTGCTGT ACGTCCTCAA GCGGGACTTC ATCGGCTACC AGAAGATCGA CCCGGTGAAA CACGACATCA ACGTCGAGGA CATCTCCTGT GACGGCTACA ACTCGCGCGT GTTCGTCTAC CACACCGACT ACGAACAGAT CATCTCGAAC GTCGAGCACG GTCGAGAGAG CCTCGACGAC TTCGTCGTCA AGCTCGCCCA GCGCTCTGGC AAGGGCATCT CGAAGCGCCA GCCACAGGTC GACGCGACCC TGCCGGACGG CTCGCGCGCG CAACTGACGC TCGGTCGAGA AGTGTCGGAC CACGGGACGA ACTACACGAT CCGGCAGTTC AAGGACGTTC CCTTCACGCC GATCGACCTC ATCAACTGGA ACACCTTCTC GCTCGACGAG ATGGCGTTTC TCTGGCTCTG TATCGAGAAC AACAAGAGCC TCATCTTCGC TGGCGGGACC GCGTCGGGGA AGACGACCAG CCTGAACGCC GTCTCGCTTT TCATCCCGTC GAACTCGAAG ATCGTCTCCA TCGAGGACAC CCGCGAGGTC GAACTGCCCC AGCGCAACTG GGTCGCCAGC GTCACCCGGC CCTCGTTCGG CGACGACGAC AAGGGCGACG TCGACGAGTT CGACCTGCTG GAAGCCGCGC TCCGCCAGCG CCCGGACTAC ATCGTCATGG GCGAGATCCG CGGCGAGGAA GGGCGCGTGC TCTTTCAGGT CATGTCGACC GGTCACACCA CCTACACCAC CTTCCACGCC GACTCCGTCG GCGAGGTCAT CAAGCGGTTC ACCACCGATC CGATCAACGT CTCGAAGACG CTGTTTACCG CCCTCGACCT CGTTTCGATC CAGACCCAGA CCCGCGTCGA CGGCAGCAAG GTCCGCCGAA ACAAGACCCT GACCGAGATC AACGAGTACT CCGCCGAGAA CGACGAAATC AACGTCCGAG ACGTCTACGA GTGGCGCGCC GAGACCGACG AGTACATCCA GATGGGCAAC TCCAACACCC TCGAAGAGAT CAAGTTCGAC CGCGGGTGGA CCCAGGAGAA ACTCGACGAG GAGCTGTTCA AGCGCAAGGT CGTACTGGCA CACCTCATCG AGAACGGGCT CAACACGTAC ACGCAGGTGG CGGCGACGAT CCAGGCGTTC ATCAACGATC CCGGAACGAT CCTCACGCTG ATCGCCAACG ACGACCTGGA GAGTTCGCTG GAGGACCTCC GAGAGATGGA GTCGGTCAAG ATCGACATCG ACGAGGCCAA AGAGGAGATG GTCCCCAGAC CCGAGGCACC GCCGGAGATG CTCGACGAGA CCGCCGACAT CCTCGACAAC GCCGGCCCGC TGTTCGAGAA GTTCCAGGAG CGCGAGACGC CGGACATCGT CTCGGCGCTG ATGAGCGGCG ACGAGGGCAC CGAGCAGACG GACGACGAGG AGGTGGACTT CGGAGAGTTC GTACCCAAAG CCGGCGCGGA GGCCGAAGGC GAATGA
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Protein sequence | MAIDDTGESR SEVTRGEVTE DPPAIVGEYT WEDLRRDHHS GGRFDRSQYL GFDPNDIESV LTDAASNAKT LKQPFDAYVD PAATPVAKGV YTWEHFKQEY YYEEDSTPPT DGDGEKIPFD PAEYLGFEPE EVESELSAAD GAAELLDNLV EQRTVDVNPE LDEDAFFSTQ DGHTTVVNRY DLEKAVPLKK KTHFTEIERY WVNKPYACVI IFHSRKENEK KYYVVEPYHN EIEDDLKGFL SNKLKTAIKY SEDDVIVQGS EADRADVIQR EAEQLLNRYD LYSGPVGSAE PGVLDQFKEF LGMEVEAQAV GTGQLDGISA RPEPAVLEDD PEQLSEYQVE KLLYVLKRDF IGYQKIDPVK HDINVEDISC DGYNSRVFVY HTDYEQIISN VEHGRESLDD FVVKLAQRSG KGISKRQPQV DATLPDGSRA QLTLGREVSD HGTNYTIRQF KDVPFTPIDL INWNTFSLDE MAFLWLCIEN NKSLIFAGGT ASGKTTSLNA VSLFIPSNSK IVSIEDTREV ELPQRNWVAS VTRPSFGDDD KGDVDEFDLL EAALRQRPDY IVMGEIRGEE GRVLFQVMST GHTTYTTFHA DSVGEVIKRF TTDPINVSKT LFTALDLVSI QTQTRVDGSK VRRNKTLTEI NEYSAENDEI NVRDVYEWRA ETDEYIQMGN SNTLEEIKFD RGWTQEKLDE ELFKRKVVLA HLIENGLNTY TQVAATIQAF INDPGTILTL IANDDLESSL EDLREMESVK IDIDEAKEEM VPRPEAPPEM LDETADILDN AGPLFEKFQE RETPDIVSAL MSGDEGTEQT DDEEVDFGEF VPKAGAEAEG E
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