Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_2135 |
Symbol | |
ID | 8411673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 2042776 |
End bp | 2044518 |
Gene Length | 1743 bp |
Protein Length | 580 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645020476 |
Product | hypothetical protein |
Protein accession | YP_003177955 |
Protein GI | 257388182 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02537] archaeal flagellin N-terminal-like domain |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.11758 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACCGGG GCCTCGGCCG GCGCGGGCAG TCGTCGCCGA TCGCCGTGAT CCTCCTCGTC TCGATGGTCG TCGCCGGCTC GCTGGCCGTC GTGACGCTGG GTGCCCAGTC GCTGTCTGAC ACCCGAGAGA CGATGGACGT CGAGCGCGCC GAGAAGGGCC TGACACAACT GGACTCGAAC GTCGCGATGG TCGCGCTGGG GAGTGCCGGC GGACAGGAGC TCTCGCTGTC GAGGACGGAC GGGGCCGCCT ATCGGCTCCG GGACGACGCG GGGCGGATGA CCGTCGCGGT GACGAACACG TCCAACGACT CCACGAAGAC GGTGATGAAC GCGACGCTCG GCTCGATCGC CTACGAGAAC GACGGCCGCT CGGTCGCGTA CCAGGGCGGC GGCGTCTGGA AGACGGACGG CGACGGCGGC TCGCTGATGG TCTCGCCGCC GGAGTTTCAC TACCGGGACG CGACGCTGAC GCTCCCGCTG GTGACCGTCT CCGGCGACGA GTCGCTCGAC GGCCGGATCG CGGTTCGGCC GGGCGGTCGC TCGACGCAGC ACTTTCCGAA CGCCTCGGCC GACGAACAGT GGGTGAACCC GCTCGACGGC GGCCGCGTCA ACGTGACCGT CAGGAGTGAG TACTACCGGG CGTGGGGCCG ATTCTTCGAA GAGCGTACGG ACGGCGAGGC CACGCTCGAT CACGCGAACG AGACGGCGAC GGTGACACTC GTCGTCCCGG CCGGGCCACA GACCGTCACG AACGCCGTCG CGGCCACGTC AGCGGGCGGC GAGATCGTAC TGGCCGGAAG CGGCGATCAG ACCCGGACCG ACAGCTACAA CTCCTCGAAA GGGACCGGGC TGTACGCCGA CACGAAGACG CACAACGGGT CGATCCGGAC GGCCGGCGAC GTGACGGTCA AGGGCAACAG CCAGGTCAAC GGCTCGCTGG CGTCGGGAGG CAAGGTGACC GTCAAAGGGA GCGGTGTGGT GACCCGAGAC GCCGGTTACA CCGACGACAT CAAGGTCACC GGCAGCGGCG GTGTCGACGG CTCGATCGAA CAGCTCTCGG GCGTCGACGG GATCGGTCCG ATCGACGCCG TCGTCGATCG ACGGTACGAG AACGCGACCG GGGACAACGA CAACGGCGAC ACGAGCGCGA TCACGGGGAC GACGCTGAGC GACGGCGACC AGACGCTCTC GGCCGGCGAG TACCACCTCG ATCGGCTCGT TCTCGACGGC GAGACGCTGA CGCTGGACAC CGGGACCGGC GGGACGATCA GTCTCGCGGT CCGTGACTAC GTCCAGCTGA AGAACGACGG CCGAATCCAC GTCGTCGGAA ACGGGACGGT CCGCCTGTAC GTCGACGGAC AGGCGACGAC GGCGTCGAAC CACCACTTCT CGATCGAGGG AAGCGGCGGC CAGATCGACA TCGACGAGGG GCAGAACGCC TCCCAGTTCT GGCTCTACGG CCGCGAGGAC TTCCAGGGAC GGATCGACGG GACCTCCAGT GACACCCATC TGTTCGAGGG CGTCGTCTTC GCACCCGGCG GCACGCTCGG CAGTAGCTCG TTCACGGTCG AGAAAGGGAG CCTCTACGGC GGTGTCGTCA CCGGGAGCGT CACGATGGAC AACGGCGGAC AGGTCCACTA CGACCGGTCG CTGAAGCGGG TCAACGCCGT CCCGCCGGCC GAGAACATCG TCCGACTGAC CTACCTCCAC GTCTCGGAGA TCGAGATCGA AGCTCGCGAC TGA
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Protein sequence | MYRGLGRRGQ SSPIAVILLV SMVVAGSLAV VTLGAQSLSD TRETMDVERA EKGLTQLDSN VAMVALGSAG GQELSLSRTD GAAYRLRDDA GRMTVAVTNT SNDSTKTVMN ATLGSIAYEN DGRSVAYQGG GVWKTDGDGG SLMVSPPEFH YRDATLTLPL VTVSGDESLD GRIAVRPGGR STQHFPNASA DEQWVNPLDG GRVNVTVRSE YYRAWGRFFE ERTDGEATLD HANETATVTL VVPAGPQTVT NAVAATSAGG EIVLAGSGDQ TRTDSYNSSK GTGLYADTKT HNGSIRTAGD VTVKGNSQVN GSLASGGKVT VKGSGVVTRD AGYTDDIKVT GSGGVDGSIE QLSGVDGIGP IDAVVDRRYE NATGDNDNGD TSAITGTTLS DGDQTLSAGE YHLDRLVLDG ETLTLDTGTG GTISLAVRDY VQLKNDGRIH VVGNGTVRLY VDGQATTASN HHFSIEGSGG QIDIDEGQNA SQFWLYGRED FQGRIDGTSS DTHLFEGVVF APGGTLGSSS FTVEKGSLYG GVVTGSVTMD NGGQVHYDRS LKRVNAVPPA ENIVRLTYLH VSEIEIEARD
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