Gene Hmuk_2116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2116 
Symbol 
ID8411654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2023491 
End bp2026235 
Gene Length2745 bp 
Protein Length914 aa 
Translation table11 
GC content66% 
IMG OID645020457 
ProductATP-dependent helicase 
Protein accessionYP_003177936 
Protein GI257388163 
COG category[R] General function prediction only 
COG ID[COG1201] Lhr-like helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.200911 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.796736 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGGAC GCGAACGGCT CGCGGGCGTC GATCCGGAGT TCGACCCCGA GAGCGTCGCG 
ATCGACGACG GCGACGTGCT GGATCGGCTC GCGCCGGTCG TCCAGGAGTG GTGGGTCGAG
CAGTTCGGCG AGTTCGTTCC GCACAACGGG GGGTTCTTCA CTCCGCCACA GAAGGAGGCG
ATCCCGCTGA TCCACGAGCG GGAGAACGCC CTGATCGCAG CGCCGACCGG CAGCGGCAAG
ACGCTCGCGT CCTTTACCGG TATCGTCAAC GAGCTGTTCG CGAAGGCTCG CGAGGACGCA
CTCGACAACA GCGTCTACTG TCTGTACGTC TCGCCGCTGA AGTCACTGGC AAACGACATC
CACCGGAATC TGGCGGTTCC GCTGACCGAC ATCACCGAGA AGCTCGACGA ACGGGGCGAG
GCCGTCGAGA TCCGACACGC GATTCGCCAC GGGGACACGA GCGACAGCGA TCGCCAGCAG
ATGCTGGAGA CGACGCCGCA CATCCTCAAC ACGACGCCGG AGACGCTGGC TATCTTGCTC
AACAGCCCGA AGTTCAAAGA GAAGCTCCGG ACGGTGGAGT ACGTCGTCGT CGACGAGATC
CACAGCCTCG CCGAGAACAA GCGCGGGACC CACCTCTCGG TGTCTCTGGA GCGCCTGGAG
GCGCTGGCCG ACGGCTCGCC GACCCGGATC GGCTGCTCGG CGACCGTCGA GCCACTCGAC
GAGATGGCCC GGTTCCTGGT CGGGTGTGAG CGCCACGGCG CGGGCGGCGA CGACTGGTCG
CCCCGCGAGT GCGAGATCGT CGACGCGCGC TTCGCCCGTG ACTTCGACGT GGAGTTGACG
ACGCCCACCG ACGACCTGAT CGACACCGCG CGAGACGTGA TCCAGGGGCG GTTCTACGAG
CAGCTCCACG AGCTGATTCA GGACCACACG AACACGCTCG TGTTCACGAA CACGCGCTCG
GGGGCCGAGC GAGTCCTGCA CAATCTCCGC TCGGAGTTCG ACGGCTACGG GGAGGACAAC
TCCGGGTGCC ACCACGGGAG CCTCTCGAAA GAGCGCCGCC AGGAGATCGA GGAGCGTCTC
AAAGCGGGGA CACTCGACGT CGTGACGACC TCGACGAGTC TGGAGCTGGG GATCGACATG
CCCCACGTCG ATCTGGTCGT GCAGGTCGGC TCACCCAAGT CCGTCGCCGC GCTCCTCCAG
CGAGTCGGTC GAGCGGGCCA CCAGCTCGGA GAGACCGTCA CGGGACGGGT CGTGGCGCTG
GACCGGGACG AGCTGATCGA GTGTGCGGTG ATGTTGAAGA AGGCAACGGA GGGGTTCGTC
GACCGGGTGT TCGTCCCCGA ACGCGCACAG GACGTGGCGA CACAGCACGT CTACGGCATG
GCGATCAACG CCGTCCGGCC CGAGCGCGAG GTCGAGGCGA TTCTCCGCCG TGCATACCCC
TATCGCGAGT ACACCGACGA CGAGTGGGAG CAGCTCTGTC GGTATCTCAC CGCCGACTAT
CCGGGGATGG AAGACAAGAA CGTCTACGCG AAGATCTGGC GAGACACGAA CGATCCCCCC
GACGGCGAGC ACCACTACGA GGAGTACCCG GTGGGCGAAC ACCTGATCGG CAAGCGCGGG
CGGATGGCCC GCGTCATCTA CATGACCAAC ATCGGGACGA TCCCCGACTC GTTCACCTGC
GACGTGTACA CCCGGGCGGG CGACGAGTGG GTCGGGCAAC TCGACGAGGG CTACCTCGAC
ACGCTTGAGA GCGGCGACGT GTTCGTCCTC GGAGGCGACA ACTTCGAGTA TCGCTATCGT
CGGGGCTCGA AGGTGTACGT CGACCGGACC AGCGCACGGC CGACGGTCCC GTCGTGGTTC
TCTGAACGGC TGCCGCTATC GTACGACCTC GGCCGGGAGA TCCTCGCCTT CCAGCGCCAG
CTACTGTCGC GACTCGACGA GGGCGGCCCG CCGGCCGTTC GACTGTGGCT CCGGGAGTTC
CCCCTGGACG AGAACACCGT GCGTGCGATC ACGCGGATGT TCTCCGAGCA GGTGGCCTAC
GCCGGCTCGA AGAGCGTCTC GACCGACGAC CGGCTCGTGA TCGAGGTCGC GCTGGACCAC
GACGAGTACG AGCGCCACTA CTACGTCCAC TCCGGGTACG GACGGCGGTT CAACGACGGC
TTCTCGCGGC TCGTCGCCTA CCGCGTCGCC CAGCGAGCCA GCGCCAACGT CCAGGTCGCC
GTCGCCGACA ACGGCTTCAC CCTCTCGATG CCGCTGAACA GGAAAGTCGA CATCGAGGGG
ATCGTCACCG ACATCGATCC GACGGCGGTT CGGGCGGATC TGCGGGCCAG CCTCGACGGG
ACGGACCTGC TCCAGCGATA CTTCCGGATC AACGCCACGC GGGCGCTGAT GATCCTCAAG
CGGTACAAGG GCTACGAGAA GTCGGCCAGC GAACAGCAGG TCAACGCCGA GATGCTGCTC
TCGTTCGCCG AGGAACTGGG CGAGTTCGCC GTCGTCGAGG AGACGTATCG CGAGATCCTG
GAAGACAAGC TCAACGTGGG CGCGATCGAG GACGTGACCG GCGCGATCCA GACCGGCGAG
CTCGCCGTCG AGACCGTCCG CGTCGACTCG CCGTCGCCCC GCGCGTTCGG GCTGGCGACG
CTGCTGGCCA GCGACGTGGT GCTGGCCGAA GACGAGTCCG CGGTGTTGCA GGCGTTTCAC
GACCGCGTGC TGGCGGCTAT CGACGACGAC GCTGGCGAGG TCTGA
 
Protein sequence
MEGRERLAGV DPEFDPESVA IDDGDVLDRL APVVQEWWVE QFGEFVPHNG GFFTPPQKEA 
IPLIHERENA LIAAPTGSGK TLASFTGIVN ELFAKAREDA LDNSVYCLYV SPLKSLANDI
HRNLAVPLTD ITEKLDERGE AVEIRHAIRH GDTSDSDRQQ MLETTPHILN TTPETLAILL
NSPKFKEKLR TVEYVVVDEI HSLAENKRGT HLSVSLERLE ALADGSPTRI GCSATVEPLD
EMARFLVGCE RHGAGGDDWS PRECEIVDAR FARDFDVELT TPTDDLIDTA RDVIQGRFYE
QLHELIQDHT NTLVFTNTRS GAERVLHNLR SEFDGYGEDN SGCHHGSLSK ERRQEIEERL
KAGTLDVVTT STSLELGIDM PHVDLVVQVG SPKSVAALLQ RVGRAGHQLG ETVTGRVVAL
DRDELIECAV MLKKATEGFV DRVFVPERAQ DVATQHVYGM AINAVRPERE VEAILRRAYP
YREYTDDEWE QLCRYLTADY PGMEDKNVYA KIWRDTNDPP DGEHHYEEYP VGEHLIGKRG
RMARVIYMTN IGTIPDSFTC DVYTRAGDEW VGQLDEGYLD TLESGDVFVL GGDNFEYRYR
RGSKVYVDRT SARPTVPSWF SERLPLSYDL GREILAFQRQ LLSRLDEGGP PAVRLWLREF
PLDENTVRAI TRMFSEQVAY AGSKSVSTDD RLVIEVALDH DEYERHYYVH SGYGRRFNDG
FSRLVAYRVA QRASANVQVA VADNGFTLSM PLNRKVDIEG IVTDIDPTAV RADLRASLDG
TDLLQRYFRI NATRALMILK RYKGYEKSAS EQQVNAEMLL SFAEELGEFA VVEETYREIL
EDKLNVGAIE DVTGAIQTGE LAVETVRVDS PSPRAFGLAT LLASDVVLAE DESAVLQAFH
DRVLAAIDDD AGEV