Gene Hmuk_2111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2111 
Symbol 
ID8411649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2017210 
End bp2020014 
Gene Length2805 bp 
Protein Length934 aa 
Translation table11 
GC content69% 
IMG OID645020452 
ProductDNA replication factor Dna2 
Protein accessionYP_003177931 
Protein GI257388158 
COG category[L] Replication, recombination and repair 
COG ID[COG1112] Superfamily I DNA and RNA helicases and helicase subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAATTAC GCGGCGTCGC GGTCGAGGTG GGCGACGAGC AGACCGTCAA CACGCAGTAC 
GGCGAGAGCG ATCTCTGTGA GGTGACGGTT CGGCCCGACG ACGGGCGCGG CGAGCCCGTC
ACCGTCACGC TGTGGGGCAA GTGGACCGAG ACCGGCGCGG TGCTCGAACC CGGCATGAGC
GTCGCCGTCT ACGACGCCGA ACCGCGCGAG TACCGAGGCG AGACCCAGTA CTCCGTGGGC
AGCGACGCAC GGATCGTCGT CGAACCGGAC TTTCTGGTCG ACGTGACCGA CGTTCGCTCG
TGGGTCCAGT GCCCGCGGAT GTACTACCTC AACAAGCTCT CGGGGACCCC TCAGGCCTAC
CCGGTCGTCA AGGGGACTAT CGTCCACGAG GTCTTCGGCG ATCTGCTCCG GGGCCGGGAC
GTGGCGGAGG CGGTAGCGGC CCACGTCGAG GACGCCGGAC TCGATCTCGG GCTGCTCGGC
CGCGACGCCG ACGAGGTCGC CGCCGACGTT CGCGACCACG CCGAGGCAAT CGAGGGGTGG
CTCCAGCAGG GAACCCTGAC CGAAGAAGAC GAGTGGCGAT CCGAGATGAC GCTCATCTCC
TCGCGCTACG GCATCAAGGG GCGGGCCGAC GCCGTCCGGC GCGGGATGCC GGTCGAGCTC
AAGACCGGGA AGAACACCCG CAGAGAGCCC CGCTTTCAGG ACAAGATCCA GGCGGCCTGC
TACGCGTTGC TCCTCGGCGA GCGCCGCGAG GAAGCGCCCG ACACCGGCAC GCTGCTGTAC
ACCAAGAACG CCGCCGTCGA GCGGACCGAG GAGTCCGGCG ATCTCTCGCC GGCCAAGGAG
TTCTCGATCA ACGACGGCCT GCTGAACTTC GTCGTCCGAA CGCGCAACGA GATCGCGGCC
ATGGAGTACG ACGCGAGCGT CCCGACGGGC TACGAGGCCG ACGCAAAGTG TGAGTACTGT
TTCGAACAAG ACACCTGTAT GGCGGTCTCC GGGCGACTGG ACCAGGAGTC CAAGGCCGGC
CAGGTCGGAA CCGCCATCCC CGAGCAAGAG CGCGAGTACT TCGACCGGTT CTACCGGGCG
ATCGAGGCCG AGCGCCGGGC CGTCCACCGC GAGTACGCCA AGCTGTGGGA CCAGCGCCCA
GAACAGCGGG CCGACGACGA CCGCGCCCTG ATCGACCTCG AACCGACGGG CGAGCGCCGA
CTCGACGGCG GCCGCTGGGA GCTGCGAGCC CGCGGCACGG GTGCGGTCTC GAAGATCCGC
GAAGGGGACA TCGCGCTCGC CAGCGACGGC GACCCGATCG ACGGCGACGC CGAACTCGCT
CGCGTCGAGC GGCTGGGTAG CGAGACGCGC GAGGAGCGAA GCGACGAGGG GGTCTCGGAG
ACGCGAGCGG GAGCGAAGCG ACACGCGAGC CGTGCGGACG AGCACAGCGA GTCCGCAGAC
GGTGCGAGCG GTGAAACCGC GAGCAGCGGC GACGATTCGA CCCGCGGTGA GATCGTCGTC
ACGACCGACG AGCCGGTCGA ACTGCGTCGC CTGGACGTGT ACCCCTCCGA GATCGGCACG
GATCGGATGT TGACGGCGCT CCACGACGCC CTGCTCACCC AGCCGCCCGA ACAGAAGGAC
GTGCTCTTCG ACCGGCGCGA GCCCGCGTTC CGATCGATCG ACGAGACGTT CATCGACAAC
AACGACGCCC AGAACGAGGC GGTCCGGCTC GCCGTCGGAG CCGACGACTG CGCGCTCGTC
CACGGGCCGC CGGGAACGGG CAAGACCTAC ACGCTCGCCC GGATCGTCCG TGCGCTGGTG
GCACGGGGCG ACCGGGTGTT GCTCTCGGCG TTCACCAACC GCGCCGTGGA CAACTGCATC
GAGGCCCTCG AAGAGCAGGG CTTTACCGAC ATCGTCCGGC TGGGCACCGA GAGCGGCGTC
CGAGAGGACA TGCAGCAGTA CCGCCTGGAG ACGGCCGGCG ATCCCGACGA CTGCGTCGGC
CGGCTGGAGG ACGCGAGCGT CGTCGCGGCG ACGACGGCCT CCTGTGGCTC CCGGGTCGCC
AAGACCCAGT CGTTCGACGT GGCGATCGTC GACGAGGCCG GCCAGCTCAC GGAGCCGGGG
ACGCTGGCCG CCACGACGCT GGCCGACCGG TTCGTCCTCG TCGGCGACCA CCAGCAGCTC
CCGCCGGTGG TCCAGAGCGA GGACGAGACG CTCTCGCGGT CGCTGTTCGA GCGACTCATC
GAGGCCTATC CCGACGCAAG CGTCCTGCTC GACCGTCAGT ACCGGATGGC CCAGCAGATC
CAGGCGTTCG CCTCGCGGGA GTTCTACGAC GGCCAGCTCC GGCCGGCCAC CGGCGAGGTG
GCGGCCCAGC GGATCGCGGA CCTGGACGGC GTCACGCTCG ACGCGCTCCC GGAGACGCTG
CGTGACGGCG TCAACTTCGT CGATCCCGAC GGGCACGTCG ACGGCAACAC GAACCCGGCG
GAGGCGAGGG CGGTCGCCGA CGTGGTCGAT GCCTACCTCG CTGCCGGGAT CGAGAGCGAG
GCCGTCGGCG TGATCGCACC CTACCGTGCG CAGGTCGCAG AGATCGACAA ACACGTCCCC
GAGGGGGTCA CCGTCGACAC GGTCGATCGC TTCCAGGGAT CGAGCAAGGA GGTCATCGTC
GTCTCCTTCG TCGCCACGGG GTCGCTCGAC GGCCCGATCT TCGAGGACTA CCGCCGCATC
AACGTCGCCC TGACGCGAGC GAAGAAGGCG CTCGTGCTGG TCGGCGACGA ACGCGCGCTC
TCGACGGACG AACTGTACGA ACGGATGGTC GAGTGGGCTC GCTGA
 
Protein sequence
MQLRGVAVEV GDEQTVNTQY GESDLCEVTV RPDDGRGEPV TVTLWGKWTE TGAVLEPGMS 
VAVYDAEPRE YRGETQYSVG SDARIVVEPD FLVDVTDVRS WVQCPRMYYL NKLSGTPQAY
PVVKGTIVHE VFGDLLRGRD VAEAVAAHVE DAGLDLGLLG RDADEVAADV RDHAEAIEGW
LQQGTLTEED EWRSEMTLIS SRYGIKGRAD AVRRGMPVEL KTGKNTRREP RFQDKIQAAC
YALLLGERRE EAPDTGTLLY TKNAAVERTE ESGDLSPAKE FSINDGLLNF VVRTRNEIAA
MEYDASVPTG YEADAKCEYC FEQDTCMAVS GRLDQESKAG QVGTAIPEQE REYFDRFYRA
IEAERRAVHR EYAKLWDQRP EQRADDDRAL IDLEPTGERR LDGGRWELRA RGTGAVSKIR
EGDIALASDG DPIDGDAELA RVERLGSETR EERSDEGVSE TRAGAKRHAS RADEHSESAD
GASGETASSG DDSTRGEIVV TTDEPVELRR LDVYPSEIGT DRMLTALHDA LLTQPPEQKD
VLFDRREPAF RSIDETFIDN NDAQNEAVRL AVGADDCALV HGPPGTGKTY TLARIVRALV
ARGDRVLLSA FTNRAVDNCI EALEEQGFTD IVRLGTESGV REDMQQYRLE TAGDPDDCVG
RLEDASVVAA TTASCGSRVA KTQSFDVAIV DEAGQLTEPG TLAATTLADR FVLVGDHQQL
PPVVQSEDET LSRSLFERLI EAYPDASVLL DRQYRMAQQI QAFASREFYD GQLRPATGEV
AAQRIADLDG VTLDALPETL RDGVNFVDPD GHVDGNTNPA EARAVADVVD AYLAAGIESE
AVGVIAPYRA QVAEIDKHVP EGVTVDTVDR FQGSSKEVIV VSFVATGSLD GPIFEDYRRI
NVALTRAKKA LVLVGDERAL STDELYERMV EWAR