| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_2058 |
|---|
| Symbol | |
|---|
| ID | 8411593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 1967268 |
|---|
| End bp | 1968245 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645020396 |
|---|
| Product | ROK family protein |
|---|
| Protein accession | YP_003177878 |
|---|
| Protein GI | 257388105 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCAGG TCGCCGTGTT CGGGATCGGA AGCACGAACT TTCGGTACGG AGTCGCGGTC
CCGAACGGAG ATATCGTCAC GGACGTGACC GTCGAACCGA CCCGGCCGTA CGACCTGGAG
CGCCAGCTCG TCGACGCCGT CGCGGATCTG ACCGCGGCGG CGACGGAACC GCTCTCTGGG
GTCGCCATCT CCTGTACCGG CCTCGTCGAC AGAAACAGAG CGCAGATCGA CGAGTTGGAC
ACGACCGACG GCGACACCGT CGATCGGATC GAAGCCGGCC GGGCGATCCA CGAGGCACAC
GGTCTCCCGG TCGTCGTCGA AAACGACTGC AACGCCGCCG TGCTGGGCGA GTGGCAGTAC
GGCTCTCGCG ACGACGTCGA CACCCTCGTC CACGTCACGT TCGGCACCGG CATCGGCGGC
GGCGTCGTCG ACGACGGCCG GCTCGTCCGG GGCGAGTCGG CCCAGGCCGG TGAGTTCGGT
TTGCTCCCGG TCGCACCCGA CAGCGAAGTG GAGAGTACGG GCGTCACGGG CGCGTGGGAG
GCGTTCTGCT CTGGACGTGG GATCGCTCGG ACCGTGTCCA GACGCATCGT CGCCGAGGAG
CCGGAGACGA CTCTCGACAC CGAGGTGACG GCACAAGACG TGTTCAGGGC CGCATCGGAG
GGGGACGCGT TCGCCCAGTC CTTTCTCGAT CGCGTCGCGC GGTACAACGC GGCCGGGATC
GGTGCCATCT GTAACGCTCT CAACCCGGGG TTGATCACCG TCGGGGGCGG CGTCGCGATG
AACAACGAGC ACGTCGTGTT GGACGGAATC GATCGGCACC TCGACGACTA CCTGTTCGTC
GAGCGTCCCG AGATCCGAAT CAGCCGACTG GGCGACGATA TCGGTCTCTA CGGCGCGCTC
GCCGCCTTCG TCGAGCAGCG CTCGGAGGCG ACGGTCTGGG AACCGACCGC GAGCGAACGA
GCCGACACGG ACGACTGA
|
|---|
| Protein sequence | MDQVAVFGIG STNFRYGVAV PNGDIVTDVT VEPTRPYDLE RQLVDAVADL TAAATEPLSG
VAISCTGLVD RNRAQIDELD TTDGDTVDRI EAGRAIHEAH GLPVVVENDC NAAVLGEWQY
GSRDDVDTLV HVTFGTGIGG GVVDDGRLVR GESAQAGEFG LLPVAPDSEV ESTGVTGAWE
AFCSGRGIAR TVSRRIVAEE PETTLDTEVT AQDVFRAASE GDAFAQSFLD RVARYNAAGI
GAICNALNPG LITVGGGVAM NNEHVVLDGI DRHLDDYLFV ERPEIRISRL GDDIGLYGAL
AAFVEQRSEA TVWEPTASER ADTDD
|
|---|
| |