Gene Hmuk_2040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2040 
Symbol 
ID8411571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1940986 
End bp1941936 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content68% 
IMG OID645020374 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003177860 
Protein GI257388087 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.68178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAC CCAACCTCAG CGACAGATCG GTGCTGGTCA CGGGCGGTGC CGGCTTCGTC 
GGCGGCCAGC TCGTCCAGAC GCTCGCCCCG GACAACGACG TGACCGTCCT CGACGACCTC
TCGACGGGCG AACGCGACCG CGTTCCCGAC GACGTGACCT TCGTCCACGG CGACGTACGC
GACCAGCGCA AGCTCAAGCA GGAGATCGAG GCGGCAGACG TCGTCTTCCA CGAGGCGGCC
GTCGTCGGCG TCCCGGCCTC GTTGCGAGAT CCGCCCCGGA GCAACCACGT CAACACCGGC
GCGACCGTCC AGTTGCTCGA CTACGCTCGC CAGTACGACA CGCGGGTCGT CCTCGCCTCC
AGCGCCGCGA TCTACGGCGA GCCCGAGTCG GTTCCCATCG AGGAGGACCA CCCCCTCGAA
CCGACCTCAC CGTACGGCGT CGACAAGCTC GCAGTCGATC ACTACGCCCG CGTGTTCGCC
CAGCAGTACG ATCTCCCTGT CGTTCCGCTG CGGTACTTCA ACATCTACGG GCCGCGGACC
GGCCCCAATC CCTACAGTGC CGTGGTCGAC GTCTTCCTCG AACAGGCTCG GAGCGGCGAC
CCGATCACGG TCCACGGGAC CGGCGAGCAG ACCCGTGACT TCGTCCACGT CGACGACGTG
GTCCAGGCGA ACCTCCGGGC CGCGACCACC GACGAGGTCG GCGTGGCCTA CAACGTCGGC
ACCGGCTCGT CGGTCTCTAT CGCGGAGCTC GCCGAGCTGA TCCGGACGGC GACGGACAGC
GACTCGCCGA TCACACACAC CGACGAGCGA CCGGGCGACA TCAGCGACAG CGAGGCGGAC
ATCTCTCGCG CACGCGAACG ACTCGGCTAC GAGCCGACGG TCGATCTCCG TTCTGGCATC
GACCGGCTCG TCGACGCGGC CGCCCCGGCG GATCCCCCCT CCTCCTCGTA G
 
Protein sequence
MSEPNLSDRS VLVTGGAGFV GGQLVQTLAP DNDVTVLDDL STGERDRVPD DVTFVHGDVR 
DQRKLKQEIE AADVVFHEAA VVGVPASLRD PPRSNHVNTG ATVQLLDYAR QYDTRVVLAS
SAAIYGEPES VPIEEDHPLE PTSPYGVDKL AVDHYARVFA QQYDLPVVPL RYFNIYGPRT
GPNPYSAVVD VFLEQARSGD PITVHGTGEQ TRDFVHVDDV VQANLRAATT DEVGVAYNVG
TGSSVSIAEL AELIRTATDS DSPITHTDER PGDISDSEAD ISRARERLGY EPTVDLRSGI
DRLVDAAAPA DPPSSS