Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_2019 |
Symbol | |
ID | 8411550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 1922291 |
End bp | 1923259 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645020353 |
Product | Protein of unknown function DUF1616 |
Protein accession | YP_003177839 |
Protein GI | 257388066 |
COG category | [S] Function unknown |
COG ID | [COG4743] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.00462585 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGGAG ATTCAGAATC CAGCCCAATG TCAGACAGAA CTGTCCAGTC GTCGTCGGTC GCGCTGCCGC GGCTGGCGTC GTCGATCGAC GTCGCAGCGG TCGTCTTGCT GGCCCTCGTG GGGGCGATCC TGTTCTCGCT CCCGCTCGGG CTCCCAGTCG CCGCGAGGGC CGTCCTCGCG GTCCCGCTCT TGCTGTTCGT GCCGGGGTAC GCCGTCGTCG CGGCCCTGTA TCCGGCGGCC CGTCGAGAGA CCGAGACGAC CGTGGACGGC CCGACGGCGA TCGAGCGCGC CGCGCTCGCG GTCGGGCTGA GCCTGTTCGT CGTCCCGCTG GTCGGAGTCG CCGTCGAGGC CGTCTGGTCG CTGACGCTCG TCCCCGTCCT CGACACCGTC GCCGCGGTGA CGATCGCCGC GGGCGTGATC GCGCTCGTCA GACGCGAGCG GTTGCCGGTC GGAGAGCGGT TCGAGGTGAC GACGCCGCTG CGCCGGGCGC TGGCGGGGAC GACCGAACGG CCGAAGACGC AGGTGTTCCT GATCGTCGCC GTCCTGTTGA GCGTCGCCGC CGTGGGTGCC GGGGGCGTCG TCGCGACGGC CGACAGCGGT CAGGAAGTCA CGGAGTTCTA CCTCACCACC GACGGACCCG ACGGCGAGCG GGTGATGGCG ACCGCCGAGA CGATCGGCAA CGAGTCGGTC CACGAGCTGG TCGTCGAGAG CCCGGAACGT CCCGGTGCGA ACTACACCGT CGTCGCCCGG ACCGGCATCG CCACCGACCG CGGCGTCGTC GAGGAACGGA CCCTCGGTCG CACGTCGCTC ACGCTCGGCG ACGGCGGGAC CGGGACGGCG ACGTACGCAC TCGACCTCGA ACGCGGCGAC CGCCCGCTCG AACTGACCTA CCTCCTCTAC GAGGGGGAGC CACCGGGGGA GCCGTCCCGA GAGAGCGCAG TTCGCTGGCT GCGCGTCCGG ATCAGGTAA
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Protein sequence | MRGDSESSPM SDRTVQSSSV ALPRLASSID VAAVVLLALV GAILFSLPLG LPVAARAVLA VPLLLFVPGY AVVAALYPAA RRETETTVDG PTAIERAALA VGLSLFVVPL VGVAVEAVWS LTLVPVLDTV AAVTIAAGVI ALVRRERLPV GERFEVTTPL RRALAGTTER PKTQVFLIVA VLLSVAAVGA GGVVATADSG QEVTEFYLTT DGPDGERVMA TAETIGNESV HELVVESPER PGANYTVVAR TGIATDRGVV EERTLGRTSL TLGDGGTGTA TYALDLERGD RPLELTYLLY EGEPPGEPSR ESAVRWLRVR IR
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