Gene Hmuk_2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2005 
Symbol 
ID8411535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1906809 
End bp1907492 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content65% 
IMG OID645020338 
Producthypothetical protein 
Protein accessionYP_003177825 
Protein GI257388052 
COG category[T] Signal transduction mechanisms 
COG ID[COG0467] RecA-superfamily ATPases implicated in signal transduction 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.035973 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTACC GTATCTGTGC ACGCCTGGCT AGCGTCGCAC ACGGACGACT ACCGATGTAC 
GATCTGGGGG AACAACTTGA CGGACGGATG GTTGCACCGG GGACGAACAT CCTCGTGAAG
GGGCCGCCGT TGACGGGAAA GCGCCGCCTG GCTCGACAGA TTCTCGCCCA CGGGCTCGAC
GCCGACCAGG GGGCGATCGT GATCACGACG CGTGACAGCG CCCGGCGGGT CGCCAGGCAG
TTCGGGTTCG ACGACGAGGA CGAAGCGCGA GCGATCGGGA TCGTCGACTG TGTCACCGAG
CACGTCGGGC GGTCGACGAC CGACACGCTG ACGGTCAAGT ACGCGACGTC GCCGGTCGAC
ATGACGGGGA TCGGGCTGGG ATTCTCGAAC TTCATCGAGT ACTTCTACGG CGACCTCGGC
CGGGAGCGCA ACCGCGTGAT GGTCGATTCG CTGTCGACGC TGCTGATGTA CGCGACGCTA
CAGACGGTCT TCGAGTTCAT GCACGCGATC ACGAGCCGTG TCGACGACGT CGACGCGGTC
GGCCTCCACG TCATCGAGTC CACCGCTCAC GACGAACAGA CGCTACACAC GATCGAGCAG
CTGTTCGACG GGACGGTCGA ACTCGACGAG AGCGGCATCG TCGCGGTCGA TCTCCCGACC
GAGGCCGAGT CGGCGAACCC GTAG
 
Protein sequence
MGYRICARLA SVAHGRLPMY DLGEQLDGRM VAPGTNILVK GPPLTGKRRL ARQILAHGLD 
ADQGAIVITT RDSARRVARQ FGFDDEDEAR AIGIVDCVTE HVGRSTTDTL TVKYATSPVD
MTGIGLGFSN FIEYFYGDLG RERNRVMVDS LSTLLMYATL QTVFEFMHAI TSRVDDVDAV
GLHVIESTAH DEQTLHTIEQ LFDGTVELDE SGIVAVDLPT EAESANP