| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_1994 |
|---|
| Symbol | |
|---|
| ID | 8411523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | + |
|---|
| Start bp | 1898433 |
|---|
| End bp | 1899650 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 645020326 |
|---|
| Product | peptidase M48 Ste24p |
|---|
| Protein accession | YP_003177814 |
|---|
| Protein GI | 257388041 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0501] Zn-dependent protease with chaperone function |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.235795 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTCCC CCAACTCCCT CGGTACGCGG TTCCGGCTGG CCGCGCTGGT CGCGCTGCTG
GTCGCCTTCG ACGCGGTCTT CGTCGTCGCC GTCTACTGGC TGGGTCATCT GGCCGCCGGC
CTGTTCTCGT GGGCCATCAC CTACGAGTCC GCCGGGCTGG TGGTCGACGC GTTGCAGTTC
CGGACGCTCC CGTCGCCGCT GGTCGTCGCC GTCGGGACCG CGGCGACGCT GGCGGGACAG
TCGGTGTTTG GCTACCGGAT GAGCGCCAAC ACCGTCCCTG GCCAGCGACA GACGTTCCGG
GACCTCTTCG CGCCGGTCGC CGATCCGGTC GAACCCGGAC AGCCTTTCGG CGGCCTGCTG
GCCGACCGCT CGCACGCGGT CTCTGCGGAC GATGAGGACG AACGCGATCC ACGCGTCGTG
CCGACGTTCG ACTACGGCGA GTACCGCGAG CGCGTCGCGG CCCGGCTCAC CGGGCTGGCA
CAGCTCTCGG ACACACCGAT TCCGGACGTG CGGGTCGTCG ACAGCGAGAC GCCGAACAGC
TACGTCGCCG GGCGGCCCGG CGAGCAGATC CTCGTCGTCA CGACGGGGCT GCTTCGCACG
CTGGACGACG AGGAACTCGA CGCCGTCCTG GCTCACGAGC TCGCCCACAT CAAGCACGGC
GACGCGTTCG TGATGACGGC CGCTGGCTTC CTGCCGACGG TCACGGCCCG CGTCAACGGA
GGGACGATCG AGTTCCTCCG CCGATCCGGA CTCGGATACC TCCCCGGCGT CGAGCAACCC
GAGGACAGTG ACACCGTCGC GTTCGGCCAG TTCCACGTCG CGATGGTCGC GCTCTCGCCG
ATCGTCCTCG CGCTCTCCTC GGCGCTGTGG CTCGCGAGCA CGGCCTGTTA CCGATCGCTC
TCGCGAGTGC GCGAGTTTCA CGCCGACGCC GGGGCGGCCG CGATCAGAGG GTCGCCGGCC
GCCCTCGTCG GCGCACTGGA GACGCTCGAG GACCTGCGTC CGTCCGAGGA CCTGCGGACC
GCCCAGACCG GCGTTCGCGA ACTGTGCGTG TTGCCCGACG CGATCGACGA CGAGGACGGG
ATCGATGGCG ACGATGCCAT CGCCCGGACG CGGCGTCGGT GGCGCTCGGT GGCCGCTCGC
GCGCTCCCCT CCTCGCATCC GCCGATCGAA TCACGGGTCG CCGCGCTCCG AGAGCAGGAG
CGCACGGGCC GCCGATAG
|
|---|
| Protein sequence | MPSPNSLGTR FRLAALVALL VAFDAVFVVA VYWLGHLAAG LFSWAITYES AGLVVDALQF
RTLPSPLVVA VGTAATLAGQ SVFGYRMSAN TVPGQRQTFR DLFAPVADPV EPGQPFGGLL
ADRSHAVSAD DEDERDPRVV PTFDYGEYRE RVAARLTGLA QLSDTPIPDV RVVDSETPNS
YVAGRPGEQI LVVTTGLLRT LDDEELDAVL AHELAHIKHG DAFVMTAAGF LPTVTARVNG
GTIEFLRRSG LGYLPGVEQP EDSDTVAFGQ FHVAMVALSP IVLALSSALW LASTACYRSL
SRVREFHADA GAAAIRGSPA ALVGALETLE DLRPSEDLRT AQTGVRELCV LPDAIDDEDG
IDGDDAIART RRRWRSVAAR ALPSSHPPIE SRVAALREQE RTGRR
|
|---|
| |