Gene Hmuk_1992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1992 
Symbol 
ID8411521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1896610 
End bp1896888 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content64% 
IMG OID645020324 
Productglutamyl-tRNA(Gln) amidotransferase, C subunit 
Protein accessionYP_003177812 
Protein GI257388039 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0721] Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit 
TIGRFAM ID[TIGR00135] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.251712 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAT CCGTCGTCGA TCCAGACGAG GTCCGTCACG TCGCGGATCT CGCCCGTGTC 
GACCTCGACG ACGACGAGGT CGAACGGTTC ACCGAACAGT TCGCGGACAT CCTCTCTTAC
TTCGAGACGC TGGACGAGGT CCCCGAAGTC GAGCGGGAGG CCGAACTGAC CAACGTCATG
CGTCCGGACG AGACCCACGA GGGGCTCAGC CAGGACGAGG CGCTCGAAAA CGCGCCGGAC
AGCGAGGCCG GCCACTTCAA GGGCCCGAAG GTGTCGTAA
 
Protein sequence
MSESVVDPDE VRHVADLARV DLDDDEVERF TEQFADILSY FETLDEVPEV EREAELTNVM 
RPDETHEGLS QDEALENAPD SEAGHFKGPK VS