Gene Hmuk_1987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1987 
Symbol 
ID8411516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1893009 
End bp1894109 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content72% 
IMG OID645020319 
Productasparagine synthase 
Protein accessionYP_003177807 
Protein GI257388034 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0367] Asparagine synthase (glutamine-hydrolyzing) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGGG GTGCCGACGC GTCGCTCGTC CGACGAGCGA TCCGGGATCG AGACTCACTG 
CCGGGGACAC GGGGGTTCGC CGGACGACTG TCCGCCGAGG GCCGACCCAC GCTCGTCAGG
GACGTGCTCG GCCGAGTCCC GCTGTTCGCC GAGCGCGGGG CCGCCGATCC GACCGCCGAC
GGCGCGTGGG CGTTCGACCC GACGACGCTC GGCGACCCGG TGTCGGTGCC CGCGGGCCAC
TGTCGGACGG CCGACGAGGA CGACGCTCGC TGGACGCTCC CCGAGGGCGA CCGGAGCGAC
GACGACACCG CGGTCGCTGC CGTCCGGCGG GCGATCCGGA CCGCGACCGA CGCCGTCGAT
ACGGCGTCGA CCGCCGTCGC CTTCTCTGGC GGCGTCGACT CCGCGCTCCT GGCCGCACGA
CTCGACGCGC CGCTGTACGT CGCCGGCTTC GAAGGGAGCC ACGACATCGC GGCCGCCCGC
TCGGCCGCGG CGGCCCTCGA TCGCGAGCTG ACCGTCGTCG AGTTCACGCA CGACGATCTG
GTGAGCGCAG TCCCGCGGAT CGCCCGCGCG ACGGGACGGA CGAACGCCAT GGACGTACAG
ATCGCGCTCC CACTCTTTCT GACCGCCGAG CGGGTCGCAG CCGACGGCTA CGACCGCCTC
GTCGTCGGGC AGGGTGCCGA CGAGCTGTTC GGTGGCTACG CGAAGGTGGC AAACGCCCCC
GACGATCACC GCATCGAGGC GGACACGGTC CGTGGCGCAC AGCGGGAAGT GATCGCCACG
CTGCCCGAGC AACTGGAGCG GGACGTGCTC GCACTGCGAG GGGCGGGCGT CGAACCGGTC
GCACCGCTGC TTTCCGACGG CGTCGTCGAG ACGGCGCTGG GACTGGTCGG CGAGCAGCTG
GTCCGGGGCG AGGACGAACG CAAGTGGGCG CTGCGACGAG CCGCCAGCGA GTGGCTCCCC
GAAGAGATCG CGCGGCGAGA CAAGAAGGCG GTCCAGTACG GCACGTACGC CGCCCGCGAA
CTCGACCGAC TCGCACGTCG AGACGGCTTC AAGCGCCGGA TGGACGATCA CGTCACCAAG
TACGTCGAGT CGCTACTGTA A
 
Protein sequence
MIRGADASLV RRAIRDRDSL PGTRGFAGRL SAEGRPTLVR DVLGRVPLFA ERGAADPTAD 
GAWAFDPTTL GDPVSVPAGH CRTADEDDAR WTLPEGDRSD DDTAVAAVRR AIRTATDAVD
TASTAVAFSG GVDSALLAAR LDAPLYVAGF EGSHDIAAAR SAAAALDREL TVVEFTHDDL
VSAVPRIARA TGRTNAMDVQ IALPLFLTAE RVAADGYDRL VVGQGADELF GGYAKVANAP
DDHRIEADTV RGAQREVIAT LPEQLERDVL ALRGAGVEPV APLLSDGVVE TALGLVGEQL
VRGEDERKWA LRRAASEWLP EEIARRDKKA VQYGTYAARE LDRLARRDGF KRRMDDHVTK
YVESLL