Gene Hmuk_1964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1964 
Symbol 
ID8411493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1873281 
End bp1874096 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content65% 
IMG OID645020296 
Productimidazole glycerol phosphate synthase subunit HisF 
Protein accessionYP_003177784 
Protein GI257388011 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0107] Imidazoleglycerol-phosphate synthase 
TIGRFAM ID[TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTCA CGAAGCGGAT CATCCCCTGT ATCGACGTGG ACTTAGACGA GGACGGCGAC 
GCCGCCGTCT ACACCGGCGT CAACTTCGAG GACCTGGCCT ACACCGGCGA CCCCGTCGAG
ATGGCCAAGA AGTACAACGA GTCCGGAGCC GACGAGTTCG TCTTTCTCGA TATCACTGCC
AGCGCAGAGG GCCGTGAGAC GATGCTCGAC ACCGTCTCGC AGGTCGCAGA CGAGGTGTTC
ATCCCCCTGA CGGTCGGCGG CGGAATTCGC ACCCGCGAAG ACATCAAAGA GACGCTGCGG
GCCGGCGCGG ACAAGGTCTC GATCAACTCC GGTGCGATCG CGCGACCGGA ACTGATCGGG
GAAGGGGCGG CGGCGTTTGG CAGCCAGTGT ATCGTCATCT CGGTCGACGC GCGGCGACGG
TTCGACGAGC AAGGCGAACA CTACGCGGAC GTCGACGGCG AGTCCTGCTG GTTCGAGTGT
ACCGTCAAGG GCGGCCGCGA AGGAACCGGC CTCGACGTGG TCGAGTGGGC CATCGAGGCC
GAGCAGCGCG GCGCGGGCGA GCTGTTCGTC AACTCGATCG ACGCCGACGG CACCAAGGAC
GGCTACGACA TCCCGCTGAC CAGCGCCGTC TGTGACGCCG TCTCCACGCC CGTGATCGCC
TCCTCTGGCT GTGGCAGTCC CGAAGACATG TACGAGGTCT TCGAGGAGGC CGGTGCCGAC
GCCGGGCTCG CGGCCTCGAT CTTCCACTTC GACGAGTACT CCATCGCAGA GACCAAGCAG
CGCCTCGACG AGATGGGCGT TCCGGTGCGT CTGTAG
 
Protein sequence
MTLTKRIIPC IDVDLDEDGD AAVYTGVNFE DLAYTGDPVE MAKKYNESGA DEFVFLDITA 
SAEGRETMLD TVSQVADEVF IPLTVGGGIR TREDIKETLR AGADKVSINS GAIARPELIG
EGAAAFGSQC IVISVDARRR FDEQGEHYAD VDGESCWFEC TVKGGREGTG LDVVEWAIEA
EQRGAGELFV NSIDADGTKD GYDIPLTSAV CDAVSTPVIA SSGCGSPEDM YEVFEEAGAD
AGLAASIFHF DEYSIAETKQ RLDEMGVPVR L