| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_1946 |
|---|
| Symbol | |
|---|
| ID | 8411474 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | + |
|---|
| Start bp | 1856283 |
|---|
| End bp | 1857539 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645020277 |
|---|
| Product | transposase, IS605 OrfB family |
|---|
| Protein accession | YP_003177766 |
|---|
| Protein GI | 257387993 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0675] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.501136 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACGA CGACTAAGAC GCTCGAAGCC ACGCTTGTCC CGCCGACAGC ACACAAAGAG
CGGAAACTGT GTGACCTGCT CGAAACCTAC CGGGAGGGGC TTCACGAGGC GTTCGACGCC
AGGTGTGACA CGATGAGCGC AACCAGCGAT GTGGTGACGC CTTACGACCT GCCGTATCAG
GCGAAAGCGG CGCTGTGCAA CTACGTCCCG CAACTTCACA ACACCTACGA CGCTCAAGAG
TTAGACGATG ACCACCCGGT TCGGCTCACC AACCAAGCCG CCGAGTTTGA CCACTCTCCG
GCGCGTGACT ACGAGTTTAC GTGGTGGGCA CCACAACCCG GTCGTGGGAC GAATTTCTGG
ATACCGCTTC GTATCAATCC CGAACAGGAG GATCTGTGGC ACGACCTCGT AGATGGGAAC
GCTTCGGCAG GCCAACTCCG CCTGCAACGG AACCGCACAT CGTGGACGTT ACACGTCACT
GTCGAGTTTC CGGTCGAAGA ACCCGACTAC GCGACGGACG GCGACGACGT GACGCACATC
GGTCTGGATA TTGGTGAAAC TGCCCTGATA ACGGGCTGTG CCCTCAAGGA CGGTTCACCA
ACTGGCCCGT TCGTGTGTGA CGGGAGCCGT GCGAAGCATC TCCGCAAAGA GATGCACACC
ACCCTGAAAC GACTCCAAGA GCGAGACGCC GTCGAGTGGC GGATTGACGA GCGATTCAAC
CACTACCAGA ACGCGCTTAC CGATATTGTC GAGAAGGCGT CTCGGCAGGC CGTCGAGTAC
GCCCGGCAAT TCGAGAAGCC GGTGCTGGTA ATGGAGAACC TGACGTACAT CCGCGAAGAA
TTGGACTACG GTTCGTACAT GAACCGGCGA CTCCATGCGT GGGCGTTCGC TCGATTACAG
AACCGCGTCG AGGACAAATC GAAAGAGGCC GGTATCCCGG TCGAATACGT CCGACCGGAG
TACACCAGCC AGACGTGCCA CGCCTGCGGC CACATCGGAA ACAGAGCCGC GCAAGCCACG
TTCCGGTGTA CCAACGACGA GTGTCACATC ACGGAGTTTC AGGGCGATAT AAACGGCGCA
ATCAACGTTG CACAACGGGC TGACCCGTGG GGAGAGAGCG TGCCGCTGAA ACCGGCAGGC
AATGACTCGC CTCGGGATGG GAGTGCCTGT GACAGCACCA CGACCCACAC CAAGCAGAGC
CAACCACGGC AGATGACGCT TAGCGAGGTC GGGTCGGAAC CCACTGCCGG TAGTTGA
|
|---|
| Protein sequence | METTTKTLEA TLVPPTAHKE RKLCDLLETY REGLHEAFDA RCDTMSATSD VVTPYDLPYQ
AKAALCNYVP QLHNTYDAQE LDDDHPVRLT NQAAEFDHSP ARDYEFTWWA PQPGRGTNFW
IPLRINPEQE DLWHDLVDGN ASAGQLRLQR NRTSWTLHVT VEFPVEEPDY ATDGDDVTHI
GLDIGETALI TGCALKDGSP TGPFVCDGSR AKHLRKEMHT TLKRLQERDA VEWRIDERFN
HYQNALTDIV EKASRQAVEY ARQFEKPVLV MENLTYIREE LDYGSYMNRR LHAWAFARLQ
NRVEDKSKEA GIPVEYVRPE YTSQTCHACG HIGNRAAQAT FRCTNDECHI TEFQGDINGA
INVAQRADPW GESVPLKPAG NDSPRDGSAC DSTTTHTKQS QPRQMTLSEV GSEPTAGS
|
|---|
| |