Gene Hmuk_1935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1935 
Symbol 
ID8411463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1843883 
End bp1844941 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content71% 
IMG OID645020266 
ProductABC transporter related 
Protein accessionYP_003177755 
Protein GI257387982 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAC CGGGCGTCGA AATCGAGGGA CTGACTGTCG GCTACGACGA CGTGACCGCG 
CTGGACGACG TGTCGCTGTC GGTCACAGAC GGCGAGTTCT TCACGCTCGT CGGCCCCTCG
GGCTGTGGGA AGACGACGAC GCTGCGCTCG ATCGCCGGCC TGGAGTCGCC CGATCGCGGG
ATCGTCTCGA TCGGCGGTCG GGACGTGACG GGCGAGTCGC CCGAGGACCG CGAGACGGGG
ATCGTCTTCC AGAACTACGC GCTCTTTCCC CACATGAGCG TCCGCGAGAA CGTCGCGTAC
GGGCTCCAGT TTCGCGACAG TCCCGCCCGC GACGACGACG AGCGGGTGAC GGAACTGCTG
GAACTCGTCG AGGTCGCCGA CCTCGCCGAC CGCGACCCCG ACCAGCTGTC CGGTGGCCAG
CAACAGCGGG TCGCGCTGGC GCGTGCGCTC GCACCCGAGC CGGCGGTGCT CTTGCTGGAC
GAACCCCTCT CGGCGCTGGA CGCACAGCTG CGCCAGCGCC TGCGCGTCCA GATAAAGCGG
ATCCAGTCGG AGCTGGGGAT CACCACCGTC TACGTCACCC ACGACCAGGC CGAGGCGCTG
GCGATCAGCG ACCGCGTGGC GGTGATGCGC GAGGGCCGCG TCGAGCAGGT CGCGACGCCG
GAGACGGTGT ATCGCGAGCC GGCGACGCGG TTCGTCGCGG AGTTCGTCGG CGACAACAAC
GTCTTCGACG GCGTCGTCGC GCCGGACGGG ACGCGGGCAA CTGTCGGCGA CGCTGCCATC
GCGCTCCCGA CCGGCAGTGA CCGCGCTCGC GGCGAGTCCG TCGCCGTCGC CGTTCGGCCC
GAAGCGATCA CCGTCGGCCG GGACGGTGCG GACACGGCGG CCACGGAGCG GACGGTCTCC
CTGCGGGCGA CGGTCGAGAC GGTGGAGTTC CTCGGTGACG CCTACCGAGT CCACTGCGAG
TGGCAGGGCC GGACGCTCGT CGTCAAGACC GACGCCGACG AACCGCCCGC GGGCGACGTG
ACGCTACGCG TCGACCCGGC GGACGTGCGC GTCCTCTGA
 
Protein sequence
MTTPGVEIEG LTVGYDDVTA LDDVSLSVTD GEFFTLVGPS GCGKTTTLRS IAGLESPDRG 
IVSIGGRDVT GESPEDRETG IVFQNYALFP HMSVRENVAY GLQFRDSPAR DDDERVTELL
ELVEVADLAD RDPDQLSGGQ QQRVALARAL APEPAVLLLD EPLSALDAQL RQRLRVQIKR
IQSELGITTV YVTHDQAEAL AISDRVAVMR EGRVEQVATP ETVYREPATR FVAEFVGDNN
VFDGVVAPDG TRATVGDAAI ALPTGSDRAR GESVAVAVRP EAITVGRDGA DTAATERTVS
LRATVETVEF LGDAYRVHCE WQGRTLVVKT DADEPPAGDV TLRVDPADVR VL