Gene Hmuk_1928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1928 
Symbol 
ID8411455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1837419 
End bp1838366 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content68% 
IMG OID645020258 
Productbeta-lactamase domain protein 
Protein accessionYP_003177748 
Protein GI257387975 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCGCC GTGTGTCACT TCCGACGCCG TTTCAGGTCG GCCCAGTCAA CAGCTACCTC 
GCCGGTCGGA CGATCGTCGA TCCCGGCCCC GACAGCGAGG AAGCGTGGTC GGAGCTGCTG
ACGGCCCTGG AAGCGCGGTC GCTCGCGCCC GACGATATCG AGCAAGTGTT GATCACCCAC
CCCCACCCGG ACCACTTCGG GCTGGCTCAC CGCTTTGGCG AACGGGGTGC CCGAATCGTC
GCCAGCGAGC CCGCGACGCC GATCCTCGAA GACTTCGCGG GACGACTCGA TCACGAGCAG
GCGTACTTCG TGGACTTCTT CGAGCGCTGT GGTATGGCGG CCGAGACCGC CGAGACCGTC
ACACAGCTGC CCGAGGCGTT CCTCAACTAC GCGTCCAGCG TCACGGTCGA TCGGTCGGTC
GCTGCCGGCG ACGAGGTCAC CGTCGACGAC AGCCTCGTCG CGGTCGACGA TCTCGTCGGC
CACTCCGTCG GCGAGGTCCT CTTCGCGTTC GAGGCCGACG GCGAACGCCG GGCGATCGTC
GGCGACAACG TGCTGGCCGA CATCACGCCG AACCCTTTCC TCCAGCCGCC GGCCGACGAC
GGCGAGGCGC GGCCGCGGGT GCTGCCGCGG TACAACGACT CGCTCGACCG GCTCGCGACG
GCGGGGTACG ATCGATTCCT GCCGGGCCAC AGAACGGACA TCGAGGAGCC AAGCGCACGC
ATCGAGGCCA TCAGAGCCGA ACACGAGGAC CGCACCGACG ATGTCGAGAC GCTACTGGAT
AGCCCCACGA CGCCGGTCAG CGTGATGGAG GGACTCTTCG GTGACCTCCC CGTGACCGAG
CAGTTCTCGG GCATGAGCGA GGCTGTCGGC CACCTGGACG TGCTGGAACA ACGAGGTCGC
GTCGAGCGAG AAGAGAGCGG CGGCGTCGTC CTCTACGAGC GCGCTTAG
 
Protein sequence
MFRRVSLPTP FQVGPVNSYL AGRTIVDPGP DSEEAWSELL TALEARSLAP DDIEQVLITH 
PHPDHFGLAH RFGERGARIV ASEPATPILE DFAGRLDHEQ AYFVDFFERC GMAAETAETV
TQLPEAFLNY ASSVTVDRSV AAGDEVTVDD SLVAVDDLVG HSVGEVLFAF EADGERRAIV
GDNVLADITP NPFLQPPADD GEARPRVLPR YNDSLDRLAT AGYDRFLPGH RTDIEEPSAR
IEAIRAEHED RTDDVETLLD SPTTPVSVME GLFGDLPVTE QFSGMSEAVG HLDVLEQRGR
VEREESGGVV LYERA