Gene Hmuk_1927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1927 
Symbol 
ID8411454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1835932 
End bp1837422 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content66% 
IMG OID645020257 
Productproton-translocating NADH-quinone oxidoreductase, chain N 
Protein accessionYP_003177747 
Protein GI257387974 
COG category[C] Energy production and conversion 
COG ID[COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)
[TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTACAAC TTCCAACGTG GACGGCCCTC AGCCCGACGC TCCTGCTCGG TCTGACGGCT 
ATCGTCCTCC TGCTCGTCGA TAGCATCGAT CCGGACTCCT CGAACAACGA ACTGCTGGCC
GGCGTCGCGG GGCTCGGCTC GATCGCCGCC GCGGCGACGA GCGTCTGGTT CATCGTCGCC
GGGACGGGGC TGCCGGCCGA GAACGGCGAA CTGATCTCCC TGTTCGACGA CCAGCTCGTC
GTCGACCAGA TGGCGCTGTT CTTCTCGTTC CTGGTCGCCA GCGTCCTCAC GCTGGTGGTC
GTCGCCAGCT ACGACTACAT GGCGGACAAG GCCCGACAGG CAAAATACTA CTCCCTGACG
GTGATGGCTG CGACGGGGAT GAGCCTGCTG GGCAGCGCCA ACGGCCTCGC GGTCGCGTTC
GTCGCCCTCG AACTGGCCTC CCTGCCGTCG TACGCGCTCG TGGCGATCCT CAAGACGAAC
AAGGGGAGCG TCGAGGCCGC ACTGAAGTAC TTCCTCGTCG GTGCGCTCTC ATCGGGCGTG
TTCCTGTACG GCATCTCGCT GGTGTACGGT GCGACCGGCT CGCTCCAGTT CGACGCCGTC
GCAGCGGCAC TGACCGACGG CGTGCCCGCG GGCATCCTCG GCATCGGCGT CCTGATGATC
GTCGGCGGCG TCGCGTTCAA GACCGCGAGC GTCCCCTTCC ACTTCTGGGC ACCGGAAGCC
TACGAGGGCG CGCCGGCACC GATCTCGGCG TTCCTCTCTT CGGCCTCCAA GGCCGCGGGC
TTCGTGCTCG CGTTCCGCGT GTTCGCTACC GCACTCATGG GCGATGCGGT CCTCGCGGTC
GTCGACTGGG TGCTGGTCTT CCAGGTGCTG GCGATCGTGA CGATGTTCGT CGGCAACTTC
GCGGCCGCGA CCCAGGAGAA CGTCAAGCGG ATGCTGGCCT ACTCCAGCGT CGGACACGCC
GGCTACGTCC TGATCGGACT GGCGGCACTG ACCGGCGGCA GCAGTGACGC CTACGTGCTC
GGGTCGGGGA TGATGCATCT GCTCGTCTAC GGCTTCATGA ACACGGGCGC GTTCCTGTTC
ATCGCGCTGG TCGAGTACTG GGACATCGGT CGCACCTTCG AGGACTACAA CGGGCTCGCG
ACCCAAGCGC CCCTGGCCTG TGCGGCCATG ACGGTGTTCC TGTTCAGTCT CGCCGGCCTC
CCCATCGGCG GGGGCTTCTT CTCGAAGTTC AACCTACTGA TGGCGACCGT CCGTTCGGGG
ACGTGGTTCC TCGGCGCGGC ACTGATCGTC AACAGCGCAC TGAGCCTCTA CTACTACACG
CGGGTCGTCA AGGCCATGTG GATCGAAGAG CCCGCCAGCG GCCTGGAGAT CGAGCGGTAC
CCGATCGGGC TGTACACCGC GGTGCTCGTG GCCGCGCTCG TGACGGTCCT GCTCTTGCCG
GGCTTCGACG CGGTGTCTCA GACCGCAGAA ACAGCTGCGA GCCTGCTCTA A
 
Protein sequence
MVQLPTWTAL SPTLLLGLTA IVLLLVDSID PDSSNNELLA GVAGLGSIAA AATSVWFIVA 
GTGLPAENGE LISLFDDQLV VDQMALFFSF LVASVLTLVV VASYDYMADK ARQAKYYSLT
VMAATGMSLL GSANGLAVAF VALELASLPS YALVAILKTN KGSVEAALKY FLVGALSSGV
FLYGISLVYG ATGSLQFDAV AAALTDGVPA GILGIGVLMI VGGVAFKTAS VPFHFWAPEA
YEGAPAPISA FLSSASKAAG FVLAFRVFAT ALMGDAVLAV VDWVLVFQVL AIVTMFVGNF
AAATQENVKR MLAYSSVGHA GYVLIGLAAL TGGSSDAYVL GSGMMHLLVY GFMNTGAFLF
IALVEYWDIG RTFEDYNGLA TQAPLACAAM TVFLFSLAGL PIGGGFFSKF NLLMATVRSG
TWFLGAALIV NSALSLYYYT RVVKAMWIEE PASGLEIERY PIGLYTAVLV AALVTVLLLP
GFDAVSQTAE TAASLL