Gene Hmuk_1919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1919 
Symbol 
ID8411446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1827835 
End bp1829517 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content65% 
IMG OID645020249 
ProductNADH-ubiquinone oxidoreductase chain 49kDa 
Protein accessionYP_003177739 
Protein GI257387966 
COG category[C] Energy production and conversion 
COG ID[COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTCG AAGAACCTGA ACCGTCGACG CAGCTCGACG TCGGCGTCAC GGACGACGGA 
CTGGATTACG ACCAGATCGA GGCGCTGATC GACGACTACG TCATCGGTCG CGAGAGCCAC
GTCAACGCCG AGGGGTTCGT CATCCGCCCC GACGACGTGC AGGCCGTGCT CTCGACCCTG
AAGACCGAGG CCGGGTTCGA CTTCTGTTCC TGTGTCACCG CACAGGAGTA CCAGGACCGC
TACGAGTCGA TCTACCACCT CAAAAAGTAC GACGACCCGA CACAGGAAGT CAGCGTCGTC
GTGCCCTCGC CGCGTGACGA CCCGCACAAC CAGTCCGGTG CCGACGTGTA CGAGACCGCC
GACTGGCACG AACGCGAGGC CTACGACCTC GTGGGGATCG AGTACGACGA CCATCCGGAT
CTCCGCCGTA TTCTCCTCCC CGAGACCTGG CAGGGCCACC CCCTCTCGCT GGACTACAAC
CAGGACAAGC CCCAGATCGT CCCGCTGCGG GAGCACGCGA ACCCGCTGCA AGACGACAAG
CAGAGCCCGA GCGACCCGGA CACGATGTTC GTCAACATCG GGCCACACCA CCCGGCGACT
CACGGTGTGC TCCACATCAA GACCGCACTC GACGGCGAGC AGATCGCCGA CCTCGAACCC
GACATCGGCT ACCTCCACCG CTGTGAGGAG CAGATGTGCC AGCAGGGGAC CTACCGCCAC
CAGATCATGC CGTACCCGGA CCGCTGGGAC TACATCTCGG CCGGGCTGCT CAACGAGTGG
GCCTACGCCC GCGCCGCCGA GGACCTGGCG GACATCGACG TGCCCGACTA CGCCCAGGTC
ATCCGAACGA TGGGCGCAGA GATGTCTCGG ATCGCCGCAC ACATGCTCGC GGTGTCGACG
TTCGCGCTGG ACATCAACGG GGACTTCACC GCGACGTTCA TGTACGGTAT CCGCGACCGC
GAGGTCGTCC AGAACCTCCT CGAAGACCTG ACCGGCCAGC GGCTGATGTT CAACTACTTC
CGGCTGGGCG GCGTGGCCTG GGATCTGCCC GAGCCCCGCG AGGAGTACTT CGAGAAAGTC
CGTGACTTCG TCGACGGCCT CCCGGAGAAA CTCACCGAGT ATCACGACCT GCTGACGAAC
AACGAGATTC TCCAGATGCG GACCGTCGAC ACGGGGGTCC TGCCGCCGGA AGACGCCAAG
AGCTACGGCG CGACGGGCCC GGTCGCACGC GGTTCCGGCA TCGACTACGA CCTCCGTCGC
GACGACCCCT ACGGCTACTA CGACGAACTC GACTGGGATG TCGTCACGGA GGACGGCTGC
GACAACTTCT CGCGCCTGCT CGTCCGCATG CGCGAGGTCG AGGAGTCGGC CAAGATCATC
GAGCAGTGTG TCGACCTGCT GGAAGACTGG CCCGAAGACG AGCGCGAGAT TCAGGCCAAC
GTGCCCCGCA CGCTGCGTCC GGACCCCGAC CGCGAGATCT ACCGTGCGGT CGAGGGCGCG
AAAGGCGAGC TGGGGATCTA CATCCGCTCG GACGGCACCG ACAAGCCGGC GCGGTTCAAG
ATCCGCAGCC CGTGTTTCAG CAACCTCCAC ACGCTGCCGA CGATGTCGGA AGGCGAGTAC
ATCCCTGACA TGATCGCCTC GCTGGGCAGC CTCGACATCG TGCTCGGGGA GGTGGACCGG
TAA
 
Protein sequence
MSLEEPEPST QLDVGVTDDG LDYDQIEALI DDYVIGRESH VNAEGFVIRP DDVQAVLSTL 
KTEAGFDFCS CVTAQEYQDR YESIYHLKKY DDPTQEVSVV VPSPRDDPHN QSGADVYETA
DWHEREAYDL VGIEYDDHPD LRRILLPETW QGHPLSLDYN QDKPQIVPLR EHANPLQDDK
QSPSDPDTMF VNIGPHHPAT HGVLHIKTAL DGEQIADLEP DIGYLHRCEE QMCQQGTYRH
QIMPYPDRWD YISAGLLNEW AYARAAEDLA DIDVPDYAQV IRTMGAEMSR IAAHMLAVST
FALDINGDFT ATFMYGIRDR EVVQNLLEDL TGQRLMFNYF RLGGVAWDLP EPREEYFEKV
RDFVDGLPEK LTEYHDLLTN NEILQMRTVD TGVLPPEDAK SYGATGPVAR GSGIDYDLRR
DDPYGYYDEL DWDVVTEDGC DNFSRLLVRM REVEESAKII EQCVDLLEDW PEDEREIQAN
VPRTLRPDPD REIYRAVEGA KGELGIYIRS DGTDKPARFK IRSPCFSNLH TLPTMSEGEY
IPDMIASLGS LDIVLGEVDR