Gene Hmuk_1906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1906 
Symbol 
ID8411433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1814655 
End bp1816265 
Gene Length1611 bp 
Protein Length536 aa 
Translation table11 
GC content71% 
IMG OID645020236 
Productphospholipase D/Transphosphatidylase 
Protein accessionYP_003177726 
Protein GI257387953 
COG category[I] Lipid transport and metabolism 
COG ID[COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.279209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCGTT TCGCCCCGCT CCTCTGTGTC TGCTGTCTGT TCCTCGCAGC GAGTGCTCTC 
CCGGCCGTCG CACAGGACGA GACGACACCG TCTGCTCCGC ACCCGGAGAT TGTCGCCGCG
TATCCGGACC CGATCGCCGA CGGCGACGCG GGCGAGTTCG TCGTCCTCCG GCTCCCCGCC
GAGGCGGAGC TCGCCGGCTA CGTTTTCACC GACGGCGACA CGACCGTCTC GCTGTCGAAC
GTCTCTCGGC GGGGGCGAGT CGCTCTCTCT GCCGGACCCG ACCGCGCTCG CAATCACACG
GCCGCGCCGG TCGTCGCGGT CGACCGACTC GGACTCGCCA ACGGCGGCGA ACACCTCCAG
GTGCGTCGGA ACGGGACCGT CGTCGACCGA GCCGTCTATC GCGACACGGA GGAGGGCGAA
CGCGTCACCT GGAACGGGAC TGAGCCCGTC TGGCGACCGA TCGGTGCGAC GGACCGGCCG
GTGGTGTCGG CAGAGGGAGG CCACGTCCGT GCGTTCGTGC TCCCGGACGG CCCCGCCGTG
CCGATCCAGA CGGTGCGTGA CGCCGACGAC CGCGTCCTCC TGGCGGGATA CACCCTCACC
TCCGGCCGGG TCACCGACGC GCTCGTCGCG GCACACGAAC GGGGCGTCAC GGTGCGCGTC
CTGCTGGAAG GCGCGCCGGT CGGCGGGCGC ACGCGCCAGG GCGCACGACG ACTCGACCGT
CTGACCGAGG CCGGGATCGA GGTTCGCCTG ATCGGCGGCG AGTACGCACG CTACGACTAC
CACCACGCGA AGTACGCGGT CGCCGACGAC CGCGCGCTCG TCCTCACCGA GAACTGGAAG
CCGAGCGGGA CCGGCGGCCA CAGCAGCCGC GGCTGGGGTG TCCGAACGAA CCAGTCCCGC
GTCGTCGACG GTCTCGCGGC GACGTACCTG GCCGACGCCA GCGGTCGCGA CGCGCGCCCC
TGGTCGCAGT TTCGCCGCGG CCGCTCCTTC GAACGGGGCG CGGTCTCGAA CGCGAGCTAC
GAGACGACCG TCGCTCCCGA GACCGTCCCC GTCGAGGAGA CGACGCTGCT GGTGACTCCG
GACAACGCCG AGCCGCGACT GGTCGATCGG CTGGACGGAG CCCAGACCTC GATCGACGTG
ATACAGGTGT CGCTGGGATG GGACGGCACG CTCGCCGACG CGCTCCGACG CGCCGCCGAC
CGCGGCGTCC GCGTTCGCCT CCTGCTGTCC AGCGCGTGGT ACGTCCGCGA GGACAACGAG
CGTCTCGCCG AGCGCTTCGA GGAGTGGGCC AGCGCCAACG ACGCACCCCT GTCGGTTCGC
CTCGCCGACC CTGCGGGACG CTACGAGAAG ATCCACGCGA AGGGCGCGAT CGTCGACGAC
CGCCGCGTCG TTCTGGGGAG CCTCAACTGG AACGACCGGG CGGCCGCGAA CAACCGCGAG
ACGGTCCTCT TACTGCGTGG CTCTGCGGTG GCCGACTACT ACGGAACGGT GTTCGACGCC
GACTGGCGGG GCGGTCGCTC GCCGCTGCCC TACGGACTGC TCGCGGCGGT CGCTGGCTGT
CTCGGACTGG CCCTGATCGT CGGCGGGAAA ATCAGGTTCG AACGACGGTA G
 
Protein sequence
MVRFAPLLCV CCLFLAASAL PAVAQDETTP SAPHPEIVAA YPDPIADGDA GEFVVLRLPA 
EAELAGYVFT DGDTTVSLSN VSRRGRVALS AGPDRARNHT AAPVVAVDRL GLANGGEHLQ
VRRNGTVVDR AVYRDTEEGE RVTWNGTEPV WRPIGATDRP VVSAEGGHVR AFVLPDGPAV
PIQTVRDADD RVLLAGYTLT SGRVTDALVA AHERGVTVRV LLEGAPVGGR TRQGARRLDR
LTEAGIEVRL IGGEYARYDY HHAKYAVADD RALVLTENWK PSGTGGHSSR GWGVRTNQSR
VVDGLAATYL ADASGRDARP WSQFRRGRSF ERGAVSNASY ETTVAPETVP VEETTLLVTP
DNAEPRLVDR LDGAQTSIDV IQVSLGWDGT LADALRRAAD RGVRVRLLLS SAWYVREDNE
RLAERFEEWA SANDAPLSVR LADPAGRYEK IHAKGAIVDD RRVVLGSLNW NDRAAANNRE
TVLLLRGSAV ADYYGTVFDA DWRGGRSPLP YGLLAAVAGC LGLALIVGGK IRFERR