Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_1906 |
Symbol | |
ID | 8411433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 1814655 |
End bp | 1816265 |
Gene Length | 1611 bp |
Protein Length | 536 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645020236 |
Product | phospholipase D/Transphosphatidylase |
Protein accession | YP_003177726 |
Protein GI | 257387953 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.279209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCCGTT TCGCCCCGCT CCTCTGTGTC TGCTGTCTGT TCCTCGCAGC GAGTGCTCTC CCGGCCGTCG CACAGGACGA GACGACACCG TCTGCTCCGC ACCCGGAGAT TGTCGCCGCG TATCCGGACC CGATCGCCGA CGGCGACGCG GGCGAGTTCG TCGTCCTCCG GCTCCCCGCC GAGGCGGAGC TCGCCGGCTA CGTTTTCACC GACGGCGACA CGACCGTCTC GCTGTCGAAC GTCTCTCGGC GGGGGCGAGT CGCTCTCTCT GCCGGACCCG ACCGCGCTCG CAATCACACG GCCGCGCCGG TCGTCGCGGT CGACCGACTC GGACTCGCCA ACGGCGGCGA ACACCTCCAG GTGCGTCGGA ACGGGACCGT CGTCGACCGA GCCGTCTATC GCGACACGGA GGAGGGCGAA CGCGTCACCT GGAACGGGAC TGAGCCCGTC TGGCGACCGA TCGGTGCGAC GGACCGGCCG GTGGTGTCGG CAGAGGGAGG CCACGTCCGT GCGTTCGTGC TCCCGGACGG CCCCGCCGTG CCGATCCAGA CGGTGCGTGA CGCCGACGAC CGCGTCCTCC TGGCGGGATA CACCCTCACC TCCGGCCGGG TCACCGACGC GCTCGTCGCG GCACACGAAC GGGGCGTCAC GGTGCGCGTC CTGCTGGAAG GCGCGCCGGT CGGCGGGCGC ACGCGCCAGG GCGCACGACG ACTCGACCGT CTGACCGAGG CCGGGATCGA GGTTCGCCTG ATCGGCGGCG AGTACGCACG CTACGACTAC CACCACGCGA AGTACGCGGT CGCCGACGAC CGCGCGCTCG TCCTCACCGA GAACTGGAAG CCGAGCGGGA CCGGCGGCCA CAGCAGCCGC GGCTGGGGTG TCCGAACGAA CCAGTCCCGC GTCGTCGACG GTCTCGCGGC GACGTACCTG GCCGACGCCA GCGGTCGCGA CGCGCGCCCC TGGTCGCAGT TTCGCCGCGG CCGCTCCTTC GAACGGGGCG CGGTCTCGAA CGCGAGCTAC GAGACGACCG TCGCTCCCGA GACCGTCCCC GTCGAGGAGA CGACGCTGCT GGTGACTCCG GACAACGCCG AGCCGCGACT GGTCGATCGG CTGGACGGAG CCCAGACCTC GATCGACGTG ATACAGGTGT CGCTGGGATG GGACGGCACG CTCGCCGACG CGCTCCGACG CGCCGCCGAC CGCGGCGTCC GCGTTCGCCT CCTGCTGTCC AGCGCGTGGT ACGTCCGCGA GGACAACGAG CGTCTCGCCG AGCGCTTCGA GGAGTGGGCC AGCGCCAACG ACGCACCCCT GTCGGTTCGC CTCGCCGACC CTGCGGGACG CTACGAGAAG ATCCACGCGA AGGGCGCGAT CGTCGACGAC CGCCGCGTCG TTCTGGGGAG CCTCAACTGG AACGACCGGG CGGCCGCGAA CAACCGCGAG ACGGTCCTCT TACTGCGTGG CTCTGCGGTG GCCGACTACT ACGGAACGGT GTTCGACGCC GACTGGCGGG GCGGTCGCTC GCCGCTGCCC TACGGACTGC TCGCGGCGGT CGCTGGCTGT CTCGGACTGG CCCTGATCGT CGGCGGGAAA ATCAGGTTCG AACGACGGTA G
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Protein sequence | MVRFAPLLCV CCLFLAASAL PAVAQDETTP SAPHPEIVAA YPDPIADGDA GEFVVLRLPA EAELAGYVFT DGDTTVSLSN VSRRGRVALS AGPDRARNHT AAPVVAVDRL GLANGGEHLQ VRRNGTVVDR AVYRDTEEGE RVTWNGTEPV WRPIGATDRP VVSAEGGHVR AFVLPDGPAV PIQTVRDADD RVLLAGYTLT SGRVTDALVA AHERGVTVRV LLEGAPVGGR TRQGARRLDR LTEAGIEVRL IGGEYARYDY HHAKYAVADD RALVLTENWK PSGTGGHSSR GWGVRTNQSR VVDGLAATYL ADASGRDARP WSQFRRGRSF ERGAVSNASY ETTVAPETVP VEETTLLVTP DNAEPRLVDR LDGAQTSIDV IQVSLGWDGT LADALRRAAD RGVRVRLLLS SAWYVREDNE RLAERFEEWA SANDAPLSVR LADPAGRYEK IHAKGAIVDD RRVVLGSLNW NDRAAANNRE TVLLLRGSAV ADYYGTVFDA DWRGGRSPLP YGLLAAVAGC LGLALIVGGK IRFERR
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