| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_1898 |
|---|
| Symbol | |
|---|
| ID | 8411425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | + |
|---|
| Start bp | 1807077 |
|---|
| End bp | 1810205 |
|---|
| Gene Length | 3129 bp |
|---|
| Protein Length | 1042 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645020228 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_003177718 |
|---|
| Protein GI | 257387945 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.755924 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCTC TTCGCGTCCT CCACGTCAGA CCCGCCGACT GGTCCGGTCC CGAGCTCGGT
GACGACTTTG CGGTCACCGT CGTCCACGGG ACCGACGGTG CTGACTTCGA GACGGCGAAT
CTGGACTGTG CCGTCGTCGA GGCGGCCCTC GGCGACGACG ATGGGATCGA CGCGCTGAGG
GCACTGCGCG AGCGGGCTCC ATCGCTGCCG GTCGTCCTCT GTACTGCGGT CGCCGACGGG
ACCGTTGGGG CTGCCGCCAC GCGCCACGGC GTGACCGAGT ACGTACCCCG AGACGGCGCG
GTTCGCGTCG CCGATCGGGT GCGAGCCGTT GTCGCCGACC ACACGTCCGA CGATGCGTCC
GCGCCCGAGT CGACGGGGAG GTCGGCGGCC GCCAGCGCCG GCATCTCGGA ACGCGAGCAG
CGCCGGCACG CGCTGACGGC GACCAACGAG GCACTGGAGT CACTCGCCAC GCTTGCGTCG
CGAAACGACC TCGAGCAGAC GGAACGGATC CGCCAAGCCT TGGAGATCGG CCGCCAGCGT
CTCGGACTCC CGCTCGGATA CTTCACCCGG ATCGACGGCT CGACCCAGCG GATCGAGGTG
ACGGCCGGTC GCTCTGATCT GGTCAGTGCG GGAATGTCGG CTCCCCTGTC GAAGACGTAC
TGTCGGCGGA CGATCCAGCA GGACGGCCTG CTGACGATCG CAGACGCCGA GCAGGAAGGG
TGGAGCGACG ACTCGGCCTT CGAGAGCTTC GGCGTCTCCT GTTATCTCGG CGGGACCGTC
GTCGTCGACG GCGAGACCTA CGGTACGCTG TGTTTCGGCG CGACGGATCC CAGAGACCGG
TCGTTTACCG ACGCCGAGAA GCGCCTCGTC AACCTGCTCG TCGAGTGGGT CGGCAACGAG
ATCGAGCGCA ACCAGCGAGA GACGGATCTC CGGCGATACG CCGACATCAT CGAAGCCGTC
GACGACGGCG TTTACGCGCT CGACGACGAG GGCCGCTTTA CCCTGGTCAA CGAGGCGATG
ACGGATCTCA CGGGCTACGA TCGCGAGACG CTGCTGGGTT CGCACACGGC CCGCATCAAG
GACGACGGGA CCGTCGACCG CGCCCAGTCG ATCCTCGTGG AGATGCTCCG CGGGGTCCGA
TCCGACGAGG AGACGTTCGA GCTGTCGATC CAGCGCGCAG ACGGGAGCGC CTTTCCCGCA
CAGGATCACA TGACGATTCT GCGCGACGAC GGCTCGTTCG CCGGGACTGC CGGCGTGATC
CGCGACGTGA CCGCACAGCG AGCCCGCGAC GAGGCACTGG AGGGGCTATT AGAGACGACC
CGATCGCTGA TGGCCGCCCA GACACCGACG GAGGTCGCAG AGATCGTCGC CGGTGCCGCC
AGCGAGACGC TGGGGTTCGA ACTCAATCTG GTTCGACTGT ACGATTCCGA CGACGACACG
CTCGTCCCGA TCGCCAGAGC CGGCGACAGC GCCGACGAGA TCGATCGGCC GATCCGGGAC
AGCGACGAGG GGTATCCCGG CGAGGCCTTC TCCACCGGGG AGACGCTCGT CGTCGACGAC
CTGAACGACC GGGCCGGCTA CGACAGCGGG CCAGCGGCGT CGGCGATCTA CCTCCCACTC
GGCGAGTACG GGGTCTGTAC GGTCGCCAGC ACCGAGCCAC GCGCCTTCGA CGACAGCGAC
CGATCGATCG CCGAGATCCT CGCCTCGAAC GCCGCCGCGG CGTTCGAGCG CGTCGATCGC
GAACAGGAGC TGTTGCGCTA CGAGACGGCC GTCGAGAACG TCAACGACAT GCTCTACGTC
CTCGACGAGG AAGGCCGATT CCAGCTGGTC ACACAGCCGC TGGCGACGTA CCTCGGCTTC
GACCGGTCCG AACTTCTCGG GGCGCGCCCG GAGATCGTCC TCGACGACGC GACCATCGAC
CGGTTCGAAG CCGAGATCGG CTCGCTCCGC CGTGGAGACG CCGACCACGC CGACGTACAG
ACCGAGCTGT CGACGGCAGA CGGCAACGAT CGACCGGTCG AGATCGAGAT CTCGCTCATC
TCCGGCGAGG GGGCGTTCCA GGGAACCGTC GGCGTCGTTC GCGACCGGAC GGAACTCCAG
CAGACCCGCG AACGGCTCCA TCAGGAACAG ACTCGCTTTT CCTACCTCTT CGACGCGCTG
CCGGATCCGG TCGTGGAGAC GGAGCTGGTC GACGGCGAGC CGGTCGTTCG ATCGGCCAAC
CCCGCGTTCG CCGAGACGTT CGATCTCGGC GACTCGTCGC TGTCGGGTCG GACGATCGAT
TCCCTGCTGC GGGGGCCGGA CGACTCGGAG TCGACCGATC CCTCGCTGTC TGCGGTCGCC
GACGACGAGT CCGTCCAGGG CGAACTCAGG CGCTGGACGG CCGACGGGTT CCGGGACTTT
CTCTTCCGGG CGGTCCCCTA TCAGCGGGGC GACGGCCGGC AGTTCGCCTT CGGTATCTAC
ACCGACATCA CAGAGCAGCG CGAGCGCCAG CGGCGACTCG AAGTCCTCAA TCGCGTCTTG
CGCCACAACC TCCGCAACGA CATGACCGTC ATTCTGGGGA CGGCCGAAGA ACTGGTCGGC
CGGGCCGACG ACGAGGAGAA CCGAACGCTC CTCAGGCGAC TCCTTCGAAA GGCCGAGGGC
GTCGTCTCGC TGTCGGACCG GGCCCGCGAG ATCGAGGCAG CCGTCCGCCG GGACCCCGCG
ACGACGGACT CCGTCTCGGT ACCGGAGATC GTCGAGAGCG TCGTCGACGA ACTCGCGACC
GAGCACCCCG AGGCGACGCT CCGGACCGAC TGCGATCCCG TTCCGCCCAT TGCGGACCCG
CGACTCCGAA CGGCGCTGTA CGAGACCGTC GAGAACGCCC TGGAACACAA CGAGGTACCG
ACCGTCTCCG TCGACGTGAC GGCCGACGCC GAGAGCGTCC GTATCCGGAT CGAGGACGAC
GGCAGCGGCA TTCCGGCGGA CGAACTCGCC GTCGTCACCG GGGACGCAGA GATCACGCAA
CTGACGCACG GCACTGGCCT GGGCCTGTGG CTCATCACGT GGCTGATCGA GTCCTACGGC
GGCACCGTGA CCTTCGAGAA CACCGCCGGG ACGACCGTGA CGCTCCGCGT GCCCCACACG
GACCGCTGA
|
|---|
| Protein sequence | MSALRVLHVR PADWSGPELG DDFAVTVVHG TDGADFETAN LDCAVVEAAL GDDDGIDALR
ALRERAPSLP VVLCTAVADG TVGAAATRHG VTEYVPRDGA VRVADRVRAV VADHTSDDAS
APESTGRSAA ASAGISEREQ RRHALTATNE ALESLATLAS RNDLEQTERI RQALEIGRQR
LGLPLGYFTR IDGSTQRIEV TAGRSDLVSA GMSAPLSKTY CRRTIQQDGL LTIADAEQEG
WSDDSAFESF GVSCYLGGTV VVDGETYGTL CFGATDPRDR SFTDAEKRLV NLLVEWVGNE
IERNQRETDL RRYADIIEAV DDGVYALDDE GRFTLVNEAM TDLTGYDRET LLGSHTARIK
DDGTVDRAQS ILVEMLRGVR SDEETFELSI QRADGSAFPA QDHMTILRDD GSFAGTAGVI
RDVTAQRARD EALEGLLETT RSLMAAQTPT EVAEIVAGAA SETLGFELNL VRLYDSDDDT
LVPIARAGDS ADEIDRPIRD SDEGYPGEAF STGETLVVDD LNDRAGYDSG PAASAIYLPL
GEYGVCTVAS TEPRAFDDSD RSIAEILASN AAAAFERVDR EQELLRYETA VENVNDMLYV
LDEEGRFQLV TQPLATYLGF DRSELLGARP EIVLDDATID RFEAEIGSLR RGDADHADVQ
TELSTADGND RPVEIEISLI SGEGAFQGTV GVVRDRTELQ QTRERLHQEQ TRFSYLFDAL
PDPVVETELV DGEPVVRSAN PAFAETFDLG DSSLSGRTID SLLRGPDDSE STDPSLSAVA
DDESVQGELR RWTADGFRDF LFRAVPYQRG DGRQFAFGIY TDITEQRERQ RRLEVLNRVL
RHNLRNDMTV ILGTAEELVG RADDEENRTL LRRLLRKAEG VVSLSDRARE IEAAVRRDPA
TTDSVSVPEI VESVVDELAT EHPEATLRTD CDPVPPIADP RLRTALYETV ENALEHNEVP
TVSVDVTADA ESVRIRIEDD GSGIPADELA VVTGDAEITQ LTHGTGLGLW LITWLIESYG
GTVTFENTAG TTVTLRVPHT DR
|
|---|
| |