Gene Hmuk_1897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1897 
Symbol 
ID8411424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1806568 
End bp1806996 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content63% 
IMG OID645020227 
Producttranscriptional regulator NikR, CopG family 
Protein accessionYP_003177717 
Protein GI257387944 
COG category[K] Transcription 
COG ID[COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.208975 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTCG TTAGCGTCTC GATGCCGGAC GAACTGCTCG AACGGATCGA CGAGTTCTCC 
GAAGATCACG GGTACACCGG CCGGAGCGAG GTGTTTCGCG AGGCCGCCCG GAACCTCCTC
GGCGAGTTCG AGGACCGCAA GCTCGAAGAT CGCGAACTGC TCGGCGTCGT CACCGTCCTG
TTCAACTACG AGACCACGAG CGTCGAAGAA CGGATGATGC ACCTGCGCCA CGAACACGAG
GGGCTGGTCG CCTCGAACTT CCACAGCCAC GTCGGCGACG CCTTCTGTAT GGAACTGTTC
GTTCTGGAGG GGCAACTCGA CGAGATCTCC GCGTTCGTGG GCAAGATCCG CGCGACCAAG
GACACGCTGA CCATCGACTA CTCGGTGACG CCGGTCGACG GCTTCGAACC GACCTTCGAG
GGCGCGTGA
 
Protein sequence
MAVVSVSMPD ELLERIDEFS EDHGYTGRSE VFREAARNLL GEFEDRKLED RELLGVVTVL 
FNYETTSVEE RMMHLRHEHE GLVASNFHSH VGDAFCMELF VLEGQLDEIS AFVGKIRATK
DTLTIDYSVT PVDGFEPTFE GA