Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_1897 |
Symbol | |
ID | 8411424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 1806568 |
End bp | 1806996 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645020227 |
Product | transcriptional regulator NikR, CopG family |
Protein accession | YP_003177717 |
Protein GI | 257387944 |
COG category | [K] Transcription |
COG ID | [COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.208975 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGTCG TTAGCGTCTC GATGCCGGAC GAACTGCTCG AACGGATCGA CGAGTTCTCC GAAGATCACG GGTACACCGG CCGGAGCGAG GTGTTTCGCG AGGCCGCCCG GAACCTCCTC GGCGAGTTCG AGGACCGCAA GCTCGAAGAT CGCGAACTGC TCGGCGTCGT CACCGTCCTG TTCAACTACG AGACCACGAG CGTCGAAGAA CGGATGATGC ACCTGCGCCA CGAACACGAG GGGCTGGTCG CCTCGAACTT CCACAGCCAC GTCGGCGACG CCTTCTGTAT GGAACTGTTC GTTCTGGAGG GGCAACTCGA CGAGATCTCC GCGTTCGTGG GCAAGATCCG CGCGACCAAG GACACGCTGA CCATCGACTA CTCGGTGACG CCGGTCGACG GCTTCGAACC GACCTTCGAG GGCGCGTGA
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Protein sequence | MAVVSVSMPD ELLERIDEFS EDHGYTGRSE VFREAARNLL GEFEDRKLED RELLGVVTVL FNYETTSVEE RMMHLRHEHE GLVASNFHSH VGDAFCMELF VLEGQLDEIS AFVGKIRATK DTLTIDYSVT PVDGFEPTFE GA
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