| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_1876 |
|---|
| Symbol | |
|---|
| ID | 8411403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | + |
|---|
| Start bp | 1785724 |
|---|
| End bp | 1787286 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645020207 |
|---|
| Product | cation transporter |
|---|
| Protein accession | YP_003177697 |
|---|
| Protein GI | 257387924 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.265158 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCTGGG GCGTCGACTG GCGGGCCAGC ACGAGCCTCG TCGGTACCGT CGTGAAGTAC
CTCTCTCTGA CGATGCTGGT GCCCCTCGTC GTCGCGGTCG TCTACGGCGA GGATATCGCC
GTCTTCGTCG TGTCGATCGC CGCCACCGCC GTGCTCGGGC TGGCACTCGA ACAGCTCGAT
CCGGAGCCAG ATGTCGGCCC CCGCGAGGCG CTCGTGCTGG TCTCGTTCGC GTGGCTGGCC
GCGGCCGCCG TCGGGACGAT CCCCTATCTG ATCGCCGGGA ACGGCATCCC GTTCGTGATG
GCTCCGAGCG CGCCCGCGTC GACGCTCGCC AATCCGGTCA ACGCACTCTT CGAGTCGACG
AGCGGCTTTA CGACGACGGG AGCCACGGTG CTGGGCGAGA TCAGCACGGA TCGTCACTCC
CACGCAGTGA TGATGTGGCG ACAGCTCACC CAGTGGCTGG GTGGCATGGG GATCATCGTC
CTGATGATCG CGATTCTGCC GGAGCTGGCG GTCAACGGCG CACAGCTGAT GCAGTCCGAG
GCCCCCGGTC CGGAACTCCA GAAGCTCACC CCCAAGATCG TCGAGACGGC CCGCGCGCTG
TGGCTGATCT ACTTCGGCTT CACCGTGCTG TACGTCGCCG TGATGTACGG CCTCCAGTTC
GTCGGGCTGG CCGAGAACAT GACGCTGTAC AACGCGGTCG CCCACGGTTT CTCGACGATG
CCGACTGGCG GCTTCTCGCC CGAGGCCGCC AGTATCGCCG CGTTCAAGCC GATCGTCCAG
TGGGTCGCGA TCCCGTTCAT GGTCGCGGCT GGTATCAACT TCGCCCTGTT CTGGCACGTC
GTCCGCGGCG AGTTCCGATC GCTTCTCGAA GACACGGAGT TCCGGGCCTA CGCCGGTGCG
ACGGCAGTAC TGATCGCCGT GCTGTCGGCG CTACTGTTCC GCGGGGCTGC ACCGCCGCTC
GAACTCGGCG GGACGACGGC CGGCGCGACC GAGAACGCGC TGCGTCAGGC GGCCTTCCAG
ATCGCTTCCC TGCTGAACTC GACGGGATTC GCGACCAGTG ACTTCGCCCA GTGGGACGAC
CACACGAAGA TCTTCCTGCT GTTTACGATG TTTATCGGCG GCTCTGCCGG ATCGACCGGC
GGGGGTGTGA AGGTCGTCCG GTGGCTCGTC GTGTTCAAAG CGGTCCGTCG GGAACTGTTC
ACGACGGCGA ATCCAAACAC GGTTCGTCCG GTCCGGCTCG CCGGACAGGT CGTCGACGAG
GACGCGATCC GCGGAATCAT GGGCTTTACG CTGCTGTACC TGGTGCTGTT CGGCATTAGC
GCGGTCTTTC TCGGTCTCGA TTCTGCGCGA GTGGGCTACG ACCTGACCGT CCTTGAGTCG
GTCAGTGCCT CACTGGCAGC ACTGGGGAAC ATCGGCCCGG GATTCGGCCG CCTGGGGCCG
TTCGGGAGCT ACCTCGATCT CCCGGACACC TCGAAGCTGT TGATGGTGTT CCTGATGTGG
ATCGGTCGCC TCGAGATCGT CCCCGTACTC GCGCTGTTCG TCGACCGACT GGACCGATCG
TAG
|
|---|
| Protein sequence | MSWGVDWRAS TSLVGTVVKY LSLTMLVPLV VAVVYGEDIA VFVVSIAATA VLGLALEQLD
PEPDVGPREA LVLVSFAWLA AAAVGTIPYL IAGNGIPFVM APSAPASTLA NPVNALFEST
SGFTTTGATV LGEISTDRHS HAVMMWRQLT QWLGGMGIIV LMIAILPELA VNGAQLMQSE
APGPELQKLT PKIVETARAL WLIYFGFTVL YVAVMYGLQF VGLAENMTLY NAVAHGFSTM
PTGGFSPEAA SIAAFKPIVQ WVAIPFMVAA GINFALFWHV VRGEFRSLLE DTEFRAYAGA
TAVLIAVLSA LLFRGAAPPL ELGGTTAGAT ENALRQAAFQ IASLLNSTGF ATSDFAQWDD
HTKIFLLFTM FIGGSAGSTG GGVKVVRWLV VFKAVRRELF TTANPNTVRP VRLAGQVVDE
DAIRGIMGFT LLYLVLFGIS AVFLGLDSAR VGYDLTVLES VSASLAALGN IGPGFGRLGP
FGSYLDLPDT SKLLMVFLMW IGRLEIVPVL ALFVDRLDRS
|
|---|
| |