Gene Hmuk_1872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1872 
Symbol 
ID8411399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1782696 
End bp1783559 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content69% 
IMG OID645020203 
ProductPrecorrin-4 C(11)-methyltransferase 
Protein accessionYP_003177693 
Protein GI257387920 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2875] Precorrin-4 methylase 
TIGRFAM ID[TIGR01465] precorrin-4 C11-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.222642 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGACC CACAGGACGC GATCGACGCG GCCACAGACG ACCGCGCGGA CCGCGACGAA 
CGGATACAGG CCCACGCCGC TGGCGACGTA CAGGACGGGA TCCCCTTCGT CGGTGCCGGC
CCCGGCGATC CGGGACTGCT GACGGTCACC GGCAGGGAAC TGGTCGAGGA CGCGGATCTG
GTCGTCCACG CCGGCTCGCT GGTCAACAGC GAGCTGCTCG ACGCCTACTG TGCGGACGCC
GAACAGGTTT CGAGCATCGG CAAGGACCTC GAAGAGCTGG TGCCGCTGAT GCGAGACGCC
TACGAGGACG GACGTGACGT GGTGCGACTC CACAGCGGCG ATCCGGCGAT CTACGGCGCG
GCGCTGGAAC AGATGGACGC GCTGGAACAC GAGGGCGTTC CGACCTACAT CGTCCCCGGC
GTGACCTCGG CGTTCGCGGC GAGTGCGACG CTGCGGACCC AGCTGACCCT GAACGGCGTG
GCGAACCACG TCGCCTTCAC CCGCCCGCAG GGCAAGACCC TCGACGCCGA GGACGACCAC
ATCTCCGAGT TCGTCGAGAT GGGCGACGTG ACGACCTGTC TCTACCTCGG CACCCACGCC
GTCGCCGAGA CGATGGACCG CCTGCTCGAC GACGGTCACG ACCCGGACAC GCCGGTCGCC
GTCGTCTATC ACGCCTCCTG GCCGGACGAG GACGTGATCG AGGGAACGAT CGAGACGATC
GGCGACCGCG TCGAGGCCGC CGGCTACCGC GCCTCGGCGC TGGTGGTGAT CGGCGACGCG
GCCCGGAAGG CGGGCTACGA ACGCTCGTAT CTGTACGACG GCTGGGCGAA TCGTGACGGA
AGCGAGAGCG AGGCGGACGA CTGA
 
Protein sequence
MTDPQDAIDA ATDDRADRDE RIQAHAAGDV QDGIPFVGAG PGDPGLLTVT GRELVEDADL 
VVHAGSLVNS ELLDAYCADA EQVSSIGKDL EELVPLMRDA YEDGRDVVRL HSGDPAIYGA
ALEQMDALEH EGVPTYIVPG VTSAFAASAT LRTQLTLNGV ANHVAFTRPQ GKTLDAEDDH
ISEFVEMGDV TTCLYLGTHA VAETMDRLLD DGHDPDTPVA VVYHASWPDE DVIEGTIETI
GDRVEAAGYR ASALVVIGDA ARKAGYERSY LYDGWANRDG SESEADD