Gene Hmuk_1856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1856 
Symbol 
ID8411383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1765825 
End bp1766613 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content69% 
IMG OID645020187 
Productcobalamin (vitamin B12) biosynthesis CbiX protein 
Protein accessionYP_003177677 
Protein GI257387904 
COG category[S] Function unknown 
COG ID[COG2138] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.162981 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCCG ACGCACTCCT CCTCATCGGC CGGCGCACGA CACACGCTCA GGCGACGTTC 
GAGACCCACG CGGCTCGTCT CGAAGACCGC GGCTTCGTCG ACGAGGTTCA CGTGTGTACT
TTCGAGAGCG AGCCGATCCG CGAACTCCGC GATCAGTTCG AAGCGGTCTC GGCCGATCGG
GTGTTCGCCG TGCCGATGTG TGTCGCCCAC TCCTACGCGA CGCTGGACGA CCTCCCGGCC
GCGCTCACGC ACGTCTCCGG AGATGTGCGC TACTGTGAAC CCCTCGGTGA GAGCCCGGTG
GTGACGGAGG TGCTGCGAAG CCGTGCCACC GACGCGATGC CCGCCACGGA GCCCACTTCG
CTGGCGCTCG TCGGTTTCGG CAGCAGCTCG AAGCCCCACC ACAGACAGAC GGCGGAGTAC
CACGCCGCCC GCATCGCCGA GCAGTCGGCC TACGACGAGG TCGAGACCTG CTATCTCCTC
CAGAACCCGA CCGTCGAATG CGTCCGCTAC AACCTCCGCA ACGAACGCGC CGTCGCCGTG
CCGCTCTTTT TCACGCGGAG CGAGGCCACG GAGCGACGGA TTCCCGAGGC CCTCGAACTG
GACCGCGGCG GGATCGAGTA CGCCGAACCG CTGGGCGAGC ACCCGCGGAT CACCGACGCC
ATCCGCGCGG CGGTCGAGCA ACAGCGCGTC CTGGCCGACG GCGACGCCGC GACGCCGACG
GCCTCGACGG CCCAGCCCAG ACCGGTCGCC ACCGACGGCG ACGGGCGCTC CACGCCGCCG
AACAACTGA
 
Protein sequence
MTSDALLLIG RRTTHAQATF ETHAARLEDR GFVDEVHVCT FESEPIRELR DQFEAVSADR 
VFAVPMCVAH SYATLDDLPA ALTHVSGDVR YCEPLGESPV VTEVLRSRAT DAMPATEPTS
LALVGFGSSS KPHHRQTAEY HAARIAEQSA YDEVETCYLL QNPTVECVRY NLRNERAVAV
PLFFTRSEAT ERRIPEALEL DRGGIEYAEP LGEHPRITDA IRAAVEQQRV LADGDAATPT
ASTAQPRPVA TDGDGRSTPP NN