Gene Hmuk_1840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1840 
Symbol 
ID8411367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1753998 
End bp1754795 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content65% 
IMG OID645020171 
ProductRibosomal protein S4E, central domain protein 
Protein accessionYP_003177661 
Protein GI257387888 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1471] Ribosomal protein S4E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAACC ATCAGAAACG ACTATCGGTC CCGAAGAGTT GGCCGGTCGA GCGCAAGACC 
GAGACGTTCA CCGTAAAGGC AGACGCTGGT CCCCACGGCG AAGCAGGAGT CCCCCTCCTG
ATCGTCCTGC GGGACGTGCT GGGCTACGTG GACTCCCGCA AGGAAGCCCG CTACGCCCTC
AACAACGACA GCGTCCTGAT CAACGGAAAG GCCGTCTCCG ACGAGGAACG CCCGGTCGGG
ATGTTCGACA TCCTGGCGTT CGTCGAGCGA GACGAGTACT ACCGCGTGTT CCCCGGCGAG
GGCGGTCGGC TGGCGCTGAC CCCCATCGAC GAGGACAGCG CACAGTCCAA GCTGGGCAAG
ATCGTCGGCA AGCGAGCGGT CAGCGGCGAT CAGATCCAGC TGACGCTGCA CGACGGCCAG
ACGCTCCTGG TCGAGGAAGA CACCGACTAC GACGGTGGCG ACTCCATCGT CGTCGCCAAC
GAGGACAGCG AGTCGCAGGG CGACTCGGAC AGTTCGAGCG GCGACGAGCC GCGAGAAGGC
GAGATCGTCG CTCACTTCGA GTACGAAGCG GGCGCGCTGG TCACCGCCGT CGACGGCGCA
CACGCCGGCG AGATCGGTGA GATCGACGAG ATTCAGGTCA CGCCGGGGAG CTCCTCGAAC
AACGTGCTCG TCGAGCAGAC CGACGGCGAC GGCTTCGAGA CCGTCGAAGA GTACGTCGTC
GTCATCGACG AGAACTTCGT CGATGAGGAC GCCGAGGACG CAGCCTCACA GGACCCCGAG
GGAGGTGACG ACGAATGA
 
Protein sequence
MSNHQKRLSV PKSWPVERKT ETFTVKADAG PHGEAGVPLL IVLRDVLGYV DSRKEARYAL 
NNDSVLINGK AVSDEERPVG MFDILAFVER DEYYRVFPGE GGRLALTPID EDSAQSKLGK
IVGKRAVSGD QIQLTLHDGQ TLLVEEDTDY DGGDSIVVAN EDSESQGDSD SSSGDEPREG
EIVAHFEYEA GALVTAVDGA HAGEIGEIDE IQVTPGSSSN NVLVEQTDGD GFETVEEYVV
VIDENFVDED AEDAASQDPE GGDDE