Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_1829 |
Symbol | |
ID | 8411356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 1748739 |
End bp | 1749482 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645020160 |
Product | ribosomal protein L4/L1e |
Protein accession | YP_003177650 |
Protein GI | 257387877 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | [TIGR03672] 50S ribosomal protein L4P |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.704715 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGCAA CAATCTACGA CCTGGACGGT AACGCAGGCG ACGAGGTCGA TCTGCCCGCG GTCTTCGAGA CCACGGTCCG ACCCGATCTC ATCGCCACTG CAGTGCGTGC CCAACAGGCA AACCGGAAGC AGGACTACGG GTCCGACGAG TACGCGGGTC TGCGAACGCC TGCCGAGTCG TTCGGTAGCG GTCGCGGGAT GGCCCACGTT CCCCGAGAGG GAGGCCAGGC ACGGCGCGTC CCCCAGGCAG TTGGGGGTCG ACCGGCCCAC CCGCCGAAGG CCGAGAAGGA CCGATCGCTG ACGATCAACG ACAAGGAGCG CAAGCTCGCG ACGCGCTCGG CCATCGCCGC GACGGCCGAC AGCGAACTCG TCGCCGAGCG CGGTCACGAG TTCGACGACG ATCTCGAACT CCCGCTCGTC GTCGACGACT CCTTCGAGGA CCTCCAGAAG ACCCAGGCCG TCGTCGACAC GCTCGAATCG CTCGGCGTTC ACGCCGACAT CGAGCGCGCC GACGACACGA AGATCAAGGC CGGCAAGGGC TCCGCCCGCG GGCGGAAGTA CCGCCGACCG TCCTCGATTC TGTTCGTCAC CAGCGAGGAG CCGTCGAAGG CGGCTCGCAA CCTCGCCGGT GCCGACGTGA CCACCGCGCG CGAGGTCAAC GCAGAGGACC TCGCACCGGG GACTGCCCCC GGTCGGCTCA CGATCTGGAC CGAGAGCGCG CTCGCGGAGG TGTCCGAGCG ATGA
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Protein sequence | MQATIYDLDG NAGDEVDLPA VFETTVRPDL IATAVRAQQA NRKQDYGSDE YAGLRTPAES FGSGRGMAHV PREGGQARRV PQAVGGRPAH PPKAEKDRSL TINDKERKLA TRSAIAATAD SELVAERGHE FDDDLELPLV VDDSFEDLQK TQAVVDTLES LGVHADIERA DDTKIKAGKG SARGRKYRRP SSILFVTSEE PSKAARNLAG ADVTTAREVN AEDLAPGTAP GRLTIWTESA LAEVSER
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