Gene Hmuk_1823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1823 
Symbol 
ID8411349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1742463 
End bp1743449 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content62% 
IMG OID645020153 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003177644 
Protein GI257387871 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCGC ATAACGACGA CACCGAGGAG AGTGGCGACG CAGTCACCGA CGGCGGGGTC 
GTCGAAGAAC AACGGCAGAC CGGATTCGGG CCGATCACCA GGCTGAACGA GCGGTTCGGT
AGCGACTTCG TCGAGTCCTC GCAGTTCTGG CTCCCGCCGT TCCTGCTGGT GGGGCTGTTC
GTCTACGGCG CGATCATCTG GAACGTCATG ATCTCGCTGA CGGACTTCCG GGGGTTCGGA
ACGCCGGACT ACAGCGATCT GGACCTGGAG ATGTACGCCC GAGCGCTGAG CGACAGCGGC
TTCGTCGACG CCGCGGTCAA CACGTTCGTT CTCCTGATCG GGTTCACGCT CGTGACGCTG
GCGATCGGGC TCGGGCTCGC GATCCTGATC GACCGGAACA TCCGATTCGA GAACACCTTC
CGGACGATCT ACCTGCTCCC GATGAGCCTC TCGTTCGTGG TGACCGCCCA GTTCTGGGCG
TGGATGTACA ACTTCAACAA CGGCGTCATC AACATCGTGC TCACGTCGGT CGGCCTCGAC
CGAGTCGACT GGATCGGTAG CCCGAATATC GTTCTCTGGG CGGTCGTGTT CGCGCTGATG
TGGCAGTTCG CCGGCTATGC GATGGTCGTC TACCTCGCCG GGTTGCGCGC GATTCCGGAC
GAGCACTACG AGGCGGCCAA GGTCGACGGC GCGTCGACGC TGCGGATGTA CTGGCGCGTC
ATCATCCCAC AGCTGAAGGG ATCGACGATC AGCGCCTCGG TCGTCCTGAT GGTGTTCGCG
CTGAAGGCCT TCGACTTCCT GTACTCGCTG GTCGGCGGTT ACCGACCACC GAACGGGGCC
GACATCCTCG CGACGAAGAT GGTCCGTGAG GCGTACGCGA ACCTCAACTG GGCGTACTCG
TCGGCGATCG CGATCATGCT GTTCCTGATG GCACTGAGCA TCGTCGGCCC GTACCTCTAC
TACCAGTACA AGGAGGGACA CCTATGA
 
Protein sequence
MASHNDDTEE SGDAVTDGGV VEEQRQTGFG PITRLNERFG SDFVESSQFW LPPFLLVGLF 
VYGAIIWNVM ISLTDFRGFG TPDYSDLDLE MYARALSDSG FVDAAVNTFV LLIGFTLVTL
AIGLGLAILI DRNIRFENTF RTIYLLPMSL SFVVTAQFWA WMYNFNNGVI NIVLTSVGLD
RVDWIGSPNI VLWAVVFALM WQFAGYAMVV YLAGLRAIPD EHYEAAKVDG ASTLRMYWRV
IIPQLKGSTI SASVVLMVFA LKAFDFLYSL VGGYRPPNGA DILATKMVRE AYANLNWAYS
SAIAIMLFLM ALSIVGPYLY YQYKEGHL