Gene Hmuk_1822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1822 
Symbol 
ID8411348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1741522 
End bp1742466 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content65% 
IMG OID645020152 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003177643 
Protein GI257387870 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG AGACACGGAC GGACGGTGGC GCTGTATCGG CGGCGGGATC GGACCAGCCA 
GCGGGACTGC TCGCGGAGAT CGACGCCTAC CGCGTCGCGC TGTACCTCGG CCTGCTCACG
ATCCTGGCGT TCTTCCTGAT CCCGATCGAA TCGGGACTGG TCACCTCGTT CAAGACCAGC
ACCGGCGTCA GCGGGACGCT CCCGTTCGCA CCGCCGACCC CGGAGGTGTT CACGCTCGCG
AAGTGGCAGA CCGCGTTCGA CGCGCTCGCG CGCGGGCTCG TCAACAGCGC GCTGTACGCG
GTGCCGGCGA CAGTCATCTC CGCGCTGCTG GGCAGCTTCG CGGCCTACGG AATCACGCAG
TCGAACTGGA AGCCCAAGTA CAAGGCACCG ATCCTCGCGC TGTTCGTCGC GGGGATCTTC
ATCCCCTACC AGGCCGTGCT CGTGCCGCTC TCGCAGTTCT GGTCGATGAT ACCACTGCAG
GAGGCACTCG GCTTCGTGTG GGCACTCGGG ATCAGCTCGG ACTACACCGG CGTCGTCGAG
CTCATCGTCA CACACGTCGC CTACGGGCTC CCGATCTGTA CGGTGCTGTT CCGATCGTAC
TACAAGAACA TGAGCGAGGA GATGATCGAA GCGGCACGGC TCGACGGCGC GTCGATCCGG
CGCGTCTATC GCCGGATCGT CCTCCCGCTG TCGGGACCGA TGTTCGCCGT CGTTCTGATC
TATCAGTTCA CCCAGATCTG GAACGACTTG CTGTTCACGC TCGTGTTGGT CCAGACCGAG
TCCAGTACGG CCGCACCGAT CGTGCTGATC CTCGCGGGCC TGGGACAGTC ACTCGAAGGA
CAGGACTTCG CGCTTCGGAT GGCGGGTGCG TTCATCGCCG CCTTGCCGAC GCTCGCGGTG
TACATCATGT TCGGCGAGGA GTTCGCCGAA GGGGTGGCGA CATGA
 
Protein sequence
MSDETRTDGG AVSAAGSDQP AGLLAEIDAY RVALYLGLLT ILAFFLIPIE SGLVTSFKTS 
TGVSGTLPFA PPTPEVFTLA KWQTAFDALA RGLVNSALYA VPATVISALL GSFAAYGITQ
SNWKPKYKAP ILALFVAGIF IPYQAVLVPL SQFWSMIPLQ EALGFVWALG ISSDYTGVVE
LIVTHVAYGL PICTVLFRSY YKNMSEEMIE AARLDGASIR RVYRRIVLPL SGPMFAVVLI
YQFTQIWNDL LFTLVLVQTE SSTAAPIVLI LAGLGQSLEG QDFALRMAGA FIAALPTLAV
YIMFGEEFAE GVAT