Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_1807 |
Symbol | |
ID | 8411333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 1728039 |
End bp | 1728638 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 645020137 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003177628 |
Protein GI | 257387855 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.366594 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGGACG AACCAGCCAC CGAGATTCTA CACGCGACGT ATCGCGCCCT CTGTGACCAC GGCTACGCGA ATCTCACCGT GCAGGACATC GCCGCCGAGG CCGACAGGAG CACCGCCTCT ATTCACTACC ACTACGACGA CAAAGACCAG CTGTTCGTCG CCTTCCTCGA TTATCTGTAC GACCGATACA CCGAGCGCCT GGCCGACGTG GACGAAGGCT CGCCGCGGGA CCGACTCGAC GCCCTGTTCG ACGTGTCGTT CGACGACGGT CCCGACGGCC CACAGCAGGC GTTTCGGACG GCGATGCTCG AAGTGACGGC ACAGGCACCG TACGACGATG CAATCCGTGA CCGTCTCGCG GAGTTCGACG AACTGCTGTT CGAACAGCTC CGAGAGACCA TCGCGGACGG CGTCGAAACG GGCGTGTTCG ACGACCGCGT CGATCCGGCC GTCGCGGCGG AGTTTCTGAC CGCGACGATC ACGGGCGCAC ACACGCGAGA AGTCGCCGCC GGTGCTCCGT CGGACCGTCT GTACGCCGCG CTCACCGAGT ACACCGAGCG ACATCTGCTG GCAGCGGGTT CGACGGGGGT CGCGGACTGA
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Protein sequence | MEDEPATEIL HATYRALCDH GYANLTVQDI AAEADRSTAS IHYHYDDKDQ LFVAFLDYLY DRYTERLADV DEGSPRDRLD ALFDVSFDDG PDGPQQAFRT AMLEVTAQAP YDDAIRDRLA EFDELLFEQL RETIADGVET GVFDDRVDPA VAAEFLTATI TGAHTREVAA GAPSDRLYAA LTEYTERHLL AAGSTGVAD
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