Gene Hmuk_1807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1807 
Symbol 
ID8411333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1728039 
End bp1728638 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content65% 
IMG OID645020137 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003177628 
Protein GI257387855 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.366594 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGACG AACCAGCCAC CGAGATTCTA CACGCGACGT ATCGCGCCCT CTGTGACCAC 
GGCTACGCGA ATCTCACCGT GCAGGACATC GCCGCCGAGG CCGACAGGAG CACCGCCTCT
ATTCACTACC ACTACGACGA CAAAGACCAG CTGTTCGTCG CCTTCCTCGA TTATCTGTAC
GACCGATACA CCGAGCGCCT GGCCGACGTG GACGAAGGCT CGCCGCGGGA CCGACTCGAC
GCCCTGTTCG ACGTGTCGTT CGACGACGGT CCCGACGGCC CACAGCAGGC GTTTCGGACG
GCGATGCTCG AAGTGACGGC ACAGGCACCG TACGACGATG CAATCCGTGA CCGTCTCGCG
GAGTTCGACG AACTGCTGTT CGAACAGCTC CGAGAGACCA TCGCGGACGG CGTCGAAACG
GGCGTGTTCG ACGACCGCGT CGATCCGGCC GTCGCGGCGG AGTTTCTGAC CGCGACGATC
ACGGGCGCAC ACACGCGAGA AGTCGCCGCC GGTGCTCCGT CGGACCGTCT GTACGCCGCG
CTCACCGAGT ACACCGAGCG ACATCTGCTG GCAGCGGGTT CGACGGGGGT CGCGGACTGA
 
Protein sequence
MEDEPATEIL HATYRALCDH GYANLTVQDI AAEADRSTAS IHYHYDDKDQ LFVAFLDYLY 
DRYTERLADV DEGSPRDRLD ALFDVSFDDG PDGPQQAFRT AMLEVTAQAP YDDAIRDRLA
EFDELLFEQL RETIADGVET GVFDDRVDPA VAAEFLTATI TGAHTREVAA GAPSDRLYAA
LTEYTERHLL AAGSTGVAD