Gene Hmuk_1803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1803 
Symbol 
ID8411329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1724468 
End bp1725676 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content52% 
IMG OID645020133 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_003177624 
Protein GI257387851 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.325377 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAA GGACATTTAT CTCGGCATCT ATCGCCAGTT TAGCCGGTTG TACGACACCG 
CAACTTAGAA GCGAGTCTCG ATCAAAGCCC GCGAACTCCA GTAGTAAGAC GATTGGTGAA
GCGACGCCGA TCGGTTCGAT ATCCGGAACA TGGCCGACGA CACACCGGAC CAACGCTCGA
ACTGCTAACA CTCCTGAATC ACCGGATTTG CAACTGAGCT GGGCCACAGC AGTAAGCGGA
TCAGTAACAC AACCTCCATC TCAACCACTG CTACGAAAAG GCATCCTCAT TCAGACCCAA
GCCCGGACAC TCTATGGTTT GGACCCAAAG ACGGGGGAAC AACTCTGGAA AACCAATGTT
CCAGAAAGCA CGCGGATTCA AACCCCGCCT ACAACGGGCG AAGCGACTGT ATACGTAACA
CTTGATGATA GTGTTGCGGC CTACGATCTC CACACAGGGG AGGAAAATCA AAAGTATACC
ATCCCGGATC ACAGTACCCC TGTAACTGCG ATTCTTGAAG TTGCAGACGA CCTGTTTGTT
GGCATCAATC AAGACGGAGA AGGGGCGCTC GCACGGCTCA CTGAAAACTC AGGGACACGC
GTCTTCAAAA CTGCGGGGAT CCCTCGCAAC CTGGCATCCA ACCGTAACTT GATCGTCGTG
CGTACCACAA GTGCGATTCA GGCGTTCTCG AAGGCTCAAG ATGAGCTTGT ATGGACCTAC
CATGGCGTCA ACGGATCACA TCCGGGTGAT GTCCCGCTTA TCACCAACAG GTTTGTTGTC
TCTGGTAATG GTGGCGGGTC AGTCATCGTT CTTAATTTGT CATCTGGACA GGTGGCCTGG
CAGGCGGAAA TTCAAGGAGT GCATGCGTTC TCCCCCACGA AGTCTGACAG CCGATTATTC
GTTTCTGATT CTGATGGGTA TCTTCAGGTG TACTCGATCG AGACAGGGAA TACAGCATAC
AAGCTCAAGA TACCTGCTGA AGCAGATATT CCAGGAATTT CTGCGGGAAA TATGGACCGC
TCGGCTACCC TTGCAGGCGG CAGTGTTTTG ATACCCAGTT CAGATGGACA GCTTGTGACA
GTGAAGGCTG CGAATGGTAG AGTAAAGTCG TCGCAAAGAT TTCGGTGGCG TGTCGCAAGC
CCACCGGCCA TTGTCGATGG TGTGGCAGTC GTGAGTGCAC CACCGAGAGT GTACGGATTC
TCCGCGTAG
 
Protein sequence
MKRRTFISAS IASLAGCTTP QLRSESRSKP ANSSSKTIGE ATPIGSISGT WPTTHRTNAR 
TANTPESPDL QLSWATAVSG SVTQPPSQPL LRKGILIQTQ ARTLYGLDPK TGEQLWKTNV
PESTRIQTPP TTGEATVYVT LDDSVAAYDL HTGEENQKYT IPDHSTPVTA ILEVADDLFV
GINQDGEGAL ARLTENSGTR VFKTAGIPRN LASNRNLIVV RTTSAIQAFS KAQDELVWTY
HGVNGSHPGD VPLITNRFVV SGNGGGSVIV LNLSSGQVAW QAEIQGVHAF SPTKSDSRLF
VSDSDGYLQV YSIETGNTAY KLKIPAEADI PGISAGNMDR SATLAGGSVL IPSSDGQLVT
VKAANGRVKS SQRFRWRVAS PPAIVDGVAV VSAPPRVYGF SA