Gene Hmuk_1775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1775 
Symbol 
ID8411301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1696516 
End bp1696824 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content66% 
IMG OID645020105 
Productlycopene cyclase domain protein 
Protein accessionYP_003177596 
Protein GI257387823 
COG category 
COG ID 
TIGRFAM ID[TIGR03462] lycopene cyclase domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0770206 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.47141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCCCGG ACATCACCGT CCTCGGCCCG TACACGTACC TCGCGACAGA GATCGTGTGG 
GGTCTCGTCG CGGCCGGCCT GCTCTGGTAC GCCGACGCGG GCCGGACCGC TGCCCGAACG
ATCGCCGTCC TCTATCCGTT CGCGTACGTC TGGGACTGGT ACACGCTGGC GGTCGGCGTG
TTCGCGATCC CGATGCGAAC CGGCGTCGAA CTGCTCGGAA TTCCGATCGA GGAACACGTC
TTCATGATCG TCGTCCCCGC GATGGTCGTC GGCGCTCACG AGACACTCGC CCGACTCGAC
GACGACTGA
 
Protein sequence
MLPDITVLGP YTYLATEIVW GLVAAGLLWY ADAGRTAART IAVLYPFAYV WDWYTLAVGV 
FAIPMRTGVE LLGIPIEEHV FMIVVPAMVV GAHETLARLD DD