| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_1765 |
|---|
| Symbol | |
|---|
| ID | 8411290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 1684903 |
|---|
| End bp | 1685646 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645020094 |
|---|
| Product | phage shock protein A, PspA |
|---|
| Protein accession | YP_003177586 |
|---|
| Protein GI | 257387813 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.900566 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.434553 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTCTGC TCCGGCGGTT TGGCTTCGTC GTCCGGTCGT GGCTCGACGC CCTGTTGAAC
CGCGTCGAAG ACCCCGTCGC AGAACTGGAC TACTCCTACG AACAACTCCG AGACGAGCTC
CAGGAGATCA ACCGCGGCAT CGCCGACCTC ACCACCCAGA AGAAGCGCCT GGAGATGCAC
CGCGAACGCC TGCGGGCGGC CGTCGAGAAG TACGACGAGC AAGCCCAGGA GGCACTCCGA
CAGGAGCGTG AGGAGCTGGC CAGACGCGCC CTGGAGAAGA AACACGCGAC GAGCGATCAG
CTCGCTGGCC TGGACGAACA GATCGACAGA CTGCAGGCGA CGCAGGACCA GCTCGTCCAG
CGCCAGATCG AACTTCGGGG ACGGATCGAG GGGTTCCGGA CCCACAAAGA GACGCTGAAG
GCGCGCCACG AAGCGGCCGA GGCGTCGGCC CGCGTCGCCG AGGCGTTCAC CGGGGTCGGC
GGCGACATGG CCGACGTGAA CCGTGCAATC GAGCGTGCGA CCGAACGGAC CGAGCAGATG
GAGGCCAGAG CGGCTGCGCT CGAAGAGCTC GAGGCGAGCG GTGCGCTCGA CGACGTGCTC
GCAGAGGGCG ACGAGATCGA CCGGGAACTG GACCGACGCT CGACCGAACA GCGAGTCGAT
CGCGAACTCG ATCAGCTGAA GACCCAGCTG GGGCACGAGA CCGAGCGGTC CCAGAGCGTC
GACGTGGACG GGGCGACGAG CTAA
|
|---|
| Protein sequence | MSLLRRFGFV VRSWLDALLN RVEDPVAELD YSYEQLRDEL QEINRGIADL TTQKKRLEMH
RERLRAAVEK YDEQAQEALR QEREELARRA LEKKHATSDQ LAGLDEQIDR LQATQDQLVQ
RQIELRGRIE GFRTHKETLK ARHEAAEASA RVAEAFTGVG GDMADVNRAI ERATERTEQM
EARAAALEEL EASGALDDVL AEGDEIDREL DRRSTEQRVD RELDQLKTQL GHETERSQSV
DVDGATS
|
|---|
| |