| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_1762 |
|---|
| Symbol | |
|---|
| ID | 8411287 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 1680445 |
|---|
| End bp | 1682937 |
|---|
| Gene Length | 2493 bp |
|---|
| Protein Length | 830 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645020091 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_003177583 |
|---|
| Protein GI | 257387810 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGC CTGTGGACGG GATTCGAGTG CTCCACGTGG ACCGCGACCC GCAGGTCCGA
CACGCCGTCG CGGCGCGGCT GGCAGACGAC GACATCGTCG TCGAGAGCGT CTCGACCAGC
GAGGCAGCCG TCGAGGAACT CGCCGACGGT CGGTTCGATT GCGTCGTCAG CGGCCACGAC
GAGTCTGCCC TCGACAGCGT CGCGCTCCTC GAAACCGTCC GCTCGGAGTA TCCGGACCTT
CCGTTCCTGC TGTGTACCGA CGCCGGAAGT GAAGCGCTCG CCAGCGAGGC GGTCGCTGCC
GGCGTCACCG AGTACCTCCC TCGCGACGGC GACGACGGGT ATCGCGCGCT CGTGGATCGG
GTCGAGCGAA CGGTCTCTGA GTACAGAGCG ACGACGCCGA TCGAACGGCA AGAACAGCGC
CTCTCGACGC TGGTGTCGAA CCTCCCCGGA ATGGTGTATC GCTGTCGAAA CGAACCGGGC
TGGCCGATGC AGTTCGTCAG CGCGGGAGTC CGGGAGCTGA CCGGCTACGA GCCCGACGCC
CTGGAGAGCG GACGGGTCGA CTGGGAGACC GACGTGGTTC ACCCCGAGGA TCGCGACGAC
GTCCGGGAGG CGGTCCAGTC GGCACTCGAC AGCGGCGAGC CCTTCGAAGT CACCTACCGG
ATCGAGACGG ACGACGGGCA ACGGCGGTGG CTGTGGGAGC GGGGCCAGTT GCTCACGCGC
GACGACGAGA CGGAGATTCT GGAGGGGTTT ATGACGGACA TCACGGCTCG CACGGAGCAC
CGCCGGGCGC TCGAAGAGCA GCGAGCGTAC GTCGAGGACG TGTTGAACTC GCTCGAAGAC
CTCTTCTACG TCGTCACGCC CGACTGGTCG CTGCGCCAGT GGAACGAGCA GGTGGTCGAC
GTGACGGGAT ACAGCGACGA GGAGATCGCG GAGATGACTG CACTGGAGTT CATCGCTCCC
GAGGACGTTC CCACGGTCGA AGCTGCCATC GAGCGTGCGA TCGAGAGCGG CTCGTCGCGA
TACGAGGCCA CGGTACAGAC GAAGTCCGGC GAGACGATTC CCTACGAGTT CCACGGCACG
GCGCTGTCGG ACACGACCGG CGAGTTCCTC GGCATCGCCG GTGTGGGCCG TGACGTGTCC
GAGCGCAAGG AGCGCGAACA GACGCTGCGC CAGTACGAGA CGCTGGCCGA GAGCGTCGCG
GACCCGATGT ACGTGATGGC TCCCGACGGG ACCATCGAGA TGATCAACGA CGCGCTGGCC
GACCACATCG GCTACGAGCG GTCGGAGATC GTCGGAGCGT CGCCCGAGGA GTTCGTCGTC
GGAGACGGCG TCGAACGGGC CGAGGAACGC ATCCGCGAGC TGTTGACCAC CGATCGAGAC
GTGGCGACCT TCGAGATGTG GACGGTCGAC GACGACGGCG AGGAGACCTA CAACGAGACG
AAAATCGCCG TCATGACCGA CGAAGACGGC GAGTTCGAGG GAACGGCCGG CGTCATCCGA
GACATCACCG AGCGGACCGA ACGCCAACGA GAGCTAGAGC GCTACGAGAC GATCCTGCAG
GCGGTTGGGG ATCCCGTCTA CACGCTCGAC GCCGAAGGGC AGTTCACCGT CGTCAACGAC
GCGATGGAGG CGCTCTCGGG CTACGACCGC GATCGACTGA TCGGCGAGCA CATCTCGAAG
CTGATGACCC CGGAAGACGT TGCGGCCGGG GAAGACCTCA TCGCCGAACT GCTCGCCGAC
CCGGATCGGA CGAACGGGAC CTTCGAGATG GGACTCCAGA CGGCCGACGG AACCCGGATC
ACCTGCGAGA ACCACGTCGC CCTGCTGCCG GCCGACGACG GGCGGTTCAG AGGGACCGCC
GGAGTCATCC GGGACATCAG CGAGCGCAAA CAGCGGGAGC GACAGCTCGA ACAGTTCGCC
AGCGTCGTCA GCCACGACCT CCGGAGCCCG CTCAACGTCG TTCAGGGACG TGTCAACCAC
GCTATTGCGA CCGGCGAGCT CGAACACCTC GACGACGCGG CCGACGCCGC CCATCGGATG
GAAGCGCTCA TCGGCGACCT CCTCACCCTC GCCCGCCAGG GACGGCGGGT CGGCGACCTC
GAACCGGTCG CTCTCGACGT GGTCGCCCAG GCGGCCTGGT CGCAACTCGA CGCCGACGAG
AAGGATCTCG TCGCCGAGAC CGACAGCCGC GTCGAGGCCG ACTTCGACCG ACTCCAGGAA
CTGTTCGACA ACCTGTTTTG CAACGCGATC ACCCACGGCG GAGCCGAGAC GGTCCGCGTC
GTCGACACCG ACGACGGGTT CGCCGTCGTC GACGACGGGG ACGGGATTCC GCCGAGCCAG
CGTGAGACGA TCTTCGAACG GGGGTTCACG ACCAGCGAGG AGGGGACCGG ATTCGGACTG
GCGATCGTCG ACACCATCGT GAGGGCTCAC GACTGGTCGA TCACGGTCGG ACGAAGCGAC
GCGGGCGGTG CGCGCTTCGA GGTCACGACC TAG
|
|---|
| Protein sequence | MTQPVDGIRV LHVDRDPQVR HAVAARLADD DIVVESVSTS EAAVEELADG RFDCVVSGHD
ESALDSVALL ETVRSEYPDL PFLLCTDAGS EALASEAVAA GVTEYLPRDG DDGYRALVDR
VERTVSEYRA TTPIERQEQR LSTLVSNLPG MVYRCRNEPG WPMQFVSAGV RELTGYEPDA
LESGRVDWET DVVHPEDRDD VREAVQSALD SGEPFEVTYR IETDDGQRRW LWERGQLLTR
DDETEILEGF MTDITARTEH RRALEEQRAY VEDVLNSLED LFYVVTPDWS LRQWNEQVVD
VTGYSDEEIA EMTALEFIAP EDVPTVEAAI ERAIESGSSR YEATVQTKSG ETIPYEFHGT
ALSDTTGEFL GIAGVGRDVS ERKEREQTLR QYETLAESVA DPMYVMAPDG TIEMINDALA
DHIGYERSEI VGASPEEFVV GDGVERAEER IRELLTTDRD VATFEMWTVD DDGEETYNET
KIAVMTDEDG EFEGTAGVIR DITERTERQR ELERYETILQ AVGDPVYTLD AEGQFTVVND
AMEALSGYDR DRLIGEHISK LMTPEDVAAG EDLIAELLAD PDRTNGTFEM GLQTADGTRI
TCENHVALLP ADDGRFRGTA GVIRDISERK QRERQLEQFA SVVSHDLRSP LNVVQGRVNH
AIATGELEHL DDAADAAHRM EALIGDLLTL ARQGRRVGDL EPVALDVVAQ AAWSQLDADE
KDLVAETDSR VEADFDRLQE LFDNLFCNAI THGGAETVRV VDTDDGFAVV DDGDGIPPSQ
RETIFERGFT TSEEGTGFGL AIVDTIVRAH DWSITVGRSD AGGARFEVTT
|
|---|
| |