Gene Hmuk_1758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1758 
Symbol 
ID8411282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1676412 
End bp1677689 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content67% 
IMG OID645020086 
Productleucine-binding protein 
Protein accessionYP_003177579 
Protein GI257387806 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0284515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAAT CTGTCGGCGG TGCTGGAACG CTGGCACTCG CCGGCTGTCT GGGATCTGAT 
AGCTCATCCA CCGCGACGAG CAGCGGCGAC GGGTCGGTCA CGATCGCGCT CACGGCACCC
GAGACGGGCC ACTACGCTCC CGTCGGTGAG CACGAACGCG ACGGGTTCGA ACTGGCCGTC
AGGCACCTCA ACGAAGGGGG TGGGATCGTC GACGACTCCG AGTACGGTTC CCTCTCGGGC
GACGGCGTGC TGGGCTCGAC CGTCGAGACT GCCGTGCTGG ACACGGAGGG CAGCCCCGCG
ACGACCGAAT CGAAGGTGCG CCCGCGTCTC GACGGCGACG AGTTCGCGGC GGTGTTTGGC
GGCGTCGCCG GATCCGTCGC ACAGACCAAT CGCGACCTCG CCGACGAGTA CGAGACGCCG
TACTTCGTCG GCTCGTCGAC GGTCGACGCA CTCACCGGGA GCGGCTGCTC GCCCCACGTC
TACCGGCACC TGTTCAACTC CACGACGCTG GCCCGGTCGC TCGTGTCCGA GCTCGCCAGC
GACATCACGA GCCAGCAGTC GACCTTCCAC GTCTACGCCG ACGCACCGGA AGGCAACGAC
CTGTTCCACT CGATCAGCGA TGTCGTCTCC CGCCGTGACC TCCCCTGGCG GCCGACGGGG
GGTATCGCGG TCCGCCCGGG AACGACGAAC TTCGAGTCGG CAATCAACGA GGGGACCCTC
TCCGACGTGA CACTCGTCTT TCTCGACGTG TTCGGACTGG ACGCCGTCAA CGCGATCCAG
TGGGCCAGAG ACACGCTCTC CGAGGATACG ACGGTGGTAG TGCCGTATCT CACGCAGTCG
ATCGCGGACT TGCTCGGGGA CCGGGTGGCG GGAATCTACG GTACGACAGG CTGGCACGAG
GATCTGGGGA CCCCACTGGC CGGCACCTTC GGCGAGGCCT ACCAGCGCGA GTACGGGCGG
TCGGACTCGG ACGCGCTCGT CGCACCGGGA CCGGCACAGA CCGTCTACGC ACAGGTCGTC
CTCTTTGCCC ACGCCGCCGA ACGAGCCGGG AGCTTCGACG CCACAGCGCT TCGGACGGAA
CTCGAAGGAC TTGGGTACGC AGCCGGTGCG GGAACACAGG AGATGCGGGC CTGTGACCAC
CAGTCTATCC GTTCGGTCCC GATCGTTCGC GGTCGAGCAC AGACGGAGTC TATCGACAAC
AACCTCGAAC TACGCGCTGT CAAACGCGGT ATGGAACCCG GCTGTGAGGA GCCGCCCGCA
TCGTCGTGCG ATCTGTAG
 
Protein sequence
MLESVGGAGT LALAGCLGSD SSSTATSSGD GSVTIALTAP ETGHYAPVGE HERDGFELAV 
RHLNEGGGIV DDSEYGSLSG DGVLGSTVET AVLDTEGSPA TTESKVRPRL DGDEFAAVFG
GVAGSVAQTN RDLADEYETP YFVGSSTVDA LTGSGCSPHV YRHLFNSTTL ARSLVSELAS
DITSQQSTFH VYADAPEGND LFHSISDVVS RRDLPWRPTG GIAVRPGTTN FESAINEGTL
SDVTLVFLDV FGLDAVNAIQ WARDTLSEDT TVVVPYLTQS IADLLGDRVA GIYGTTGWHE
DLGTPLAGTF GEAYQREYGR SDSDALVAPG PAQTVYAQVV LFAHAAERAG SFDATALRTE
LEGLGYAAGA GTQEMRACDH QSIRSVPIVR GRAQTESIDN NLELRAVKRG MEPGCEEPPA
SSCDL