Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_1749 |
Symbol | |
ID | 8411273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 1665269 |
End bp | 1666597 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 645020077 |
Product | ABC transporter substrate-binding protein |
Protein accession | YP_003177570 |
Protein GI | 257387797 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.239653 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.31899 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAACGG ACGACCGTGG TGGCTGCGGT TCGCGGGCGA CGCGGCGGCG TGTACTCGAA TCTCTGGGTG GGACCGGAGC GGTGGCGCTG GCCGGCTGTC TCGGATCTGA CGGGGCGACG ACAGAAACCA GCACCGACGA TTCGGTGACG ATCGGACTGT CCTCGCCCGA GTCCGGTCGC TACTCTCCGA TCGGCGATCA CGAGCGGCGA GGGTTCGAAC TCGCGGTCAC CCATCTCAAC GAGGGCGGGG GCCTGGTCGG TGGCGATGGG TTCGCTCGTC TCTCAGGGGA CGGCGTGCTC GGACGGACCG TCGAGACCGC CGTCGCCGAC ACGGAAGGGG ACGCCTCGAC GGCCGAAACG AACCTCCAGC AGCGACTCGG CGACGACGAG CTGGCCATGT TCACCGGCGG TGTCGCGGGC AGCGTCGTCA CGACACACCG GGATCTGGCG GACGAACACG AGACGCCGTA CTTCGTCGGC ACGTCGACGC TGAACCAGCT CACCGGCGAG AACTGCTCGC CACACGTCTA CCGCGAGCTG TTCAACTCTC GCACGCTGGC CCGTGCCCTC GTCCCGGAAG TCGTCTCCGA CATCGACGGT GCCCAGTTCT TCTTCCAGGT CACTACCGAC ACGATCGAAG GACGCGACCT CAAGCGGAGC ATCAACCGCT ACGCGACCGC GAGCGACCTC GACTTGCGGC CCATCGGCAC GACGACGGTC CGGTCGGGCT CGACCGACTT CGAGCGAGCG CTCTCGGAAG CGTCGAGCAA CAGCGTCGAC ATCGTCTTCC TCGATCTGTT CGGCCTCGAC GCCGTCAACG CGATCCAGCA GGCCAAAGAG ATCCTCTCAG AGGATGCAGT CATCGTCGTT CCGTTGCTCA CCCAGTCGGT CTCGGATTCG CTGGGCGAGC GGGTCGAGGG AGTCTACGGC ACCGTCGGCT GGCACGAGAA CCTCGATACG CCGCTGTCGA GCAAGTTCGG CGACGCCTAC CAGAACGAGT ACTCGGGAAC GATGAGCACC ACGGCCCTCG TCCCACCGGG CCCGGCCCAG AACACGTACG GACAGGTCCT GTTGTGGGCC AGCGCGGCCG AGGCCGCCGG CACGTTCGAC GCGGACGCGG TCCGGTCCGA ACTCGAAGGG GTCGAGTACG CACTCGGTGC GGGTTCAGAG ACGATGCGGG CCTGCGACCA CCAGGCGATG CGAGCCGTCC CGGTCGTTCG TGGCAGTACC GGGACGGACT CGGTCGGGAA CTACTTCGAG CTGTTGAACG GGCGGCGAAA CGTGGAACCC GGCTGTGACG AACCGCCCGC GTCGGCGTGT GAGCTGTAA
|
Protein sequence | MTTDDRGGCG SRATRRRVLE SLGGTGAVAL AGCLGSDGAT TETSTDDSVT IGLSSPESGR YSPIGDHERR GFELAVTHLN EGGGLVGGDG FARLSGDGVL GRTVETAVAD TEGDASTAET NLQQRLGDDE LAMFTGGVAG SVVTTHRDLA DEHETPYFVG TSTLNQLTGE NCSPHVYREL FNSRTLARAL VPEVVSDIDG AQFFFQVTTD TIEGRDLKRS INRYATASDL DLRPIGTTTV RSGSTDFERA LSEASSNSVD IVFLDLFGLD AVNAIQQAKE ILSEDAVIVV PLLTQSVSDS LGERVEGVYG TVGWHENLDT PLSSKFGDAY QNEYSGTMST TALVPPGPAQ NTYGQVLLWA SAAEAAGTFD ADAVRSELEG VEYALGAGSE TMRACDHQAM RAVPVVRGST GTDSVGNYFE LLNGRRNVEP GCDEPPASAC EL
|
| |