Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_1744 |
Symbol | |
ID | 8411268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 1659398 |
End bp | 1660105 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645020072 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003177565 |
Protein GI | 257387792 |
COG category | [K] Transcription |
COG ID | [COG1709] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.571892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.738269 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTCGGG GACCGCGGGC GGAACTGGCC GAGAAGATGG CGGGCGAGAT CGCGCTCAGC GACGCGCCCG GAGAGACCGT CCGCAAGTGG CGCACGGACT TCGAAGTGAG CCAGACGGGA CTGGCCGACG CGCTCGACGT GTCGCCCTCT GTCGTCTCCG ACTACGAGAG CGGGCGGCGC GACAACCCCG GCATCGGCGT GGTCCAGCGG GTCGTCTCGG CGCTGCTGGA CATCGACGAG CGACGCGGCG GCGAACACAT CCGCCAGCAC GCTCGCGTCC TGTCGGCCGG CTTCGACTCC GACGTGGTCC ACGATCTGGG CGAGTACCCG GCCAACCTCC CACTGGCGGA CTTTTACGAC GCCATCGACG CCACCGAGCT GGTCGGTGGC GACGCCGACA CCGTCGCCGG CCACACCGTC ATCAACTCCA TCGCCGCGAT CACGCGGCTC TCTTCGGACG AGTTCTACCA GCTCTACGGG CAGTCGACCA ACCGGGCGCT GGTGTTTACG GACGTGACTC GCGGCGAGTC ACCGCTGGTC GCGCTGCGAG TCGTGACGCC GACGCCCAAC GCGGTCGTCC TGCACGGACT CGAATCGGAC GCCCTCTGGG ATCACGCGGT CGATCTCGCC CGCATCGACG GCTTCTCGCT CGCCGTCGCG GACGCCGAGA TGGACGAGAT GCTGGCGGGG CTGCGGGAAC TCCGGTAG
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Protein sequence | MVRGPRAELA EKMAGEIALS DAPGETVRKW RTDFEVSQTG LADALDVSPS VVSDYESGRR DNPGIGVVQR VVSALLDIDE RRGGEHIRQH ARVLSAGFDS DVVHDLGEYP ANLPLADFYD AIDATELVGG DADTVAGHTV INSIAAITRL SSDEFYQLYG QSTNRALVFT DVTRGESPLV ALRVVTPTPN AVVLHGLESD ALWDHAVDLA RIDGFSLAVA DAEMDEMLAG LRELR
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