| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_1691 |
|---|
| Symbol | |
|---|
| ID | 8411214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 1620031 |
|---|
| End bp | 1620747 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645020018 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_003177512 |
|---|
| Protein GI | 257387739 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.319951 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.463785 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGGA TCGTGTTGCA AAGCAGCGAT TGGCTCTTCG TCGCCAGCAA CGCGGACTTC
CTGCTGCTGG GAACGATCGT CACGGTGTTG CTGACGATCA CCAGTCTCTC GCTGGGGTTT
CTGGCCGGAT TCCCGATGGG GGCGATCGAG GTGTACGGGC CGGACTCGCT CCGGTCGGTG
GTCGGCACCG TCGGCGTCGT CTTCCGTGGT ACGCCGATCG TCGTGCTCGT CGTGGTGCTG
TACTTCGGGC TCCCGATCCC ACAGCTTGGC ACCGTGCCGG CGCTCGACAT CCAGGTGACG
CCGTTTCTCG CGGCGGCGCT GGCGCTCGGG CTCCGTAGCG GGGCCTACCA GAGCCAAGTG
TTCCGGGGCG CGATACAGTC GATCAGCGAA GGTCAGATGG AGGGGGCCCG CTCGATCGGC
ATGAGCAAGC TCCAGGCCAT CCGCCACGTG ATCTTCCCGC AGGCGATCCG GCGCTCGATC
CCCGGCTTTC AAAACGAGTT CACGATCGTG CTGAAAGACA CCAGCGTCGC CTTCGCGATC
GGACTGGCGG AGCTCCTGAC TCGGGCCGAG AACCTCTATC TCCAGCCCGG CCGGGGCACC
GCCGTGATGG AGGTCATCCT CACGATCACC GCGATCTACT TCGTGTTGAC CGTCGCGACA
AACCGGACGC TCGATCGACT ACACGACCGC TACGCGATCC CAGGAGGCAA CGAATGA
|
|---|
| Protein sequence | MAGIVLQSSD WLFVASNADF LLLGTIVTVL LTITSLSLGF LAGFPMGAIE VYGPDSLRSV
VGTVGVVFRG TPIVVLVVVL YFGLPIPQLG TVPALDIQVT PFLAAALALG LRSGAYQSQV
FRGAIQSISE GQMEGARSIG MSKLQAIRHV IFPQAIRRSI PGFQNEFTIV LKDTSVAFAI
GLAELLTRAE NLYLQPGRGT AVMEVILTIT AIYFVLTVAT NRTLDRLHDR YAIPGGNE
|
|---|
| |